Personal tools

TSS:Hg 103717.1

From referenceTSS

Revision as of 20:21, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_103717.1
Species:human
Chr:chr10
TSS Classification:yes
Start:6583643
End:6583672
Strand:+
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000414894.1 uc057rnk.1
Distance:4
GeneID:
HGNC/MGI_ID:HGNC:44689
UniProt_ID:
Gene_name:PRKCQ antisense RNA 1
Gene_symbol:PRKCQ-AS1
Gene_synonyms:ENST00000414894.1
Gene_source:HGNC:44689



Transcript annotation


Transcript_name:ENST00000414894.1 uc057rnk.1
Distance:4
Num_trans:24
All_trans:ENST00000414894.1:4 uc057rnk.1:4 ENST00000449648.1:7 uc057rnl.1:7 ENST00000607982.5:133 ENST00000608526.5:133 ENST00000623015.3:133 ENST00000615210.4:133 ENST00000613985.4:133 uc057rnm.1:133 uc057rnn.1:133 uc057rno.1:133 uc057rnp.1:133 uc057rnq.1:133 ENST00000625102.3:139 uc057rnr.1:139 ENST00000624974.3:159 ENST00000623160.3:159 ENST00000624678.3:159 uc057rns.1:159 uc057rnt.1:159 uc057rnu.1:159 ENST00000625147.3:189 uc057rnv.1:189



TATA-Box annotation


Distance to TSS:-3012
Nearest PromoterID:NM_001323265
Entrez ID:5588
Nearest Unigene:Hs.498570
Nearest Refseq:NM_006257
Nearest Ensembl:ENSG00000065675
Gene Name:PRKCQ antisense RNA 1
Gene Alias:PRKCT
Gene Description:protein kinase C theta
Gene Type:protein-coding
CpG%:0.03
GC%:0.487562
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):