Basic information about the TSS
| TSS ID: | hg_105361.1 |
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| Species: | human |
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| Chr: | chr10 |
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| TSS Classification: | yes |
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| Start: | 69801874 |
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| End: | 69801885 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | |
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| End of the center position in the TSS region: | |
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Gene and protein annotation
| Transcript_name: | NM_080805 NM_080800 NM_080802 NM_080801 NM_001130103 NM_080798 |
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| Distance: | 3 |
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| GeneID: | 1305 |
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| HGNC/MGI_ID: | HGNC:2190 |
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| UniProt_ID: | Q5TAT6 |
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| Gene_name: | collagen type XIII alpha 1 |
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| Gene_symbol: | COL13A1 |
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| Gene_synonyms: | |
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| Gene_source: | HGNC:2190 |
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Transcript annotation
| Transcript_name: | NM_080805 NM_080800 NM_080802 NM_080801 NM_001130103 NM_080798 |
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| Distance: | 3 |
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| Num_trans: | 21 |
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| All_trans: | NM_080805:3 NM_080800:3 NM_080802:3 NM_080801:3 NM_001130103:3 NM_080798:3 BC139913:31 ENST00000479733.5:46 uc057tui.1:46 ENST00000398978.7:47 ENST00000354547.7:47 ENST00000357811.7:47 uc057tuj.1:47 uc057tuk.1:47 uc057tul.1:47 AJ293624:47 ENST00000520267.5:233 ENST00000398969.7:233 uc057tum.1:233 uc057tun.1:233 BC136385:233 |
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TATA-Box annotation
| Distance to TSS: | -8 |
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| Nearest PromoterID: | NM_080802 |
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| Entrez ID: | 1305 |
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| Nearest Unigene: | Hs.695934 |
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| Nearest Refseq: | NM_005203 |
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| Nearest Ensembl: | ENSG00000197467 |
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| Gene Name: | collagen type XIII alpha 1 |
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| Gene Alias: | CMS19 |
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| Gene Description: | collagen type XIII alpha 1 chain |
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| Gene Type: | protein-coding |
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| CpG%: | 0.08 |
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| GC%: | 0.616915 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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