Personal tools

TSS:Hg 105976.1

From referenceTSS

Revision as of 21:58, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_105976.1
Species:human
Chr:chr10
TSS Classification:yes
Start:86668719
End:86668733
Strand:+
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000542786.1 ENST00000623007.3 ENST00000372056.8 ENST00000263066.10 uc057uqh.1 uc009xsy.4 uc001kds.4 uc001kdu.4 AF276807 AF276808 AF276809 KF772970 AJ133767 AJ133768 KU178543 KU178544 KU178545
Distance:-28
GeneID:11155
HGNC/MGI_ID:HGNC:15710
UniProt_ID:A0A0C4DGG7 A0A0S2Z501 A0A0S2Z521 O75112 V5T7C5
Gene_name:LIM domain binding 3
Gene_symbol:LDB3
Gene_synonyms:KIAA0613 PDLIM6 ZASP
Gene_source:HGNC:15710



Transcript annotation


Transcript_name:ENST00000542786.1 ENST00000623007.3 ENST00000372056.8 ENST00000263066.10 uc057uqh.1 uc009xsy.4 uc001kds.4 uc001kdu.4 AF276807 AF276808 AF276809 KF772970 AJ133767 AJ133768 KU178543 KU178544 KU178545
Distance:-28
Num_trans:44
All_trans:ENST00000542786.1:-28 ENST00000623007.3:-28 ENST00000372056.8:-28 ENST00000263066.10:-28 uc057uqh.1:-28 uc009xsy.4:-28 uc001kds.4:-28 uc001kdu.4:-28 AF276807:-28 AF276808:-28 AF276809:-28 KF772970:-28 AJ133767:-28 AJ133768:-28 KU178543:-28 KU178544:-28 KU178545:-28 AB383921:-29 KJ898368:-30 KR710344:-30 KR710345:-30 KR710346:-30 KR710347:-30 BC111457:-33 ENST00000361373.8:-49 uc001kdv.4:-49 AB014513:-49 NM_007078:-51 NM_001080115:-51 NM_001171611:-51 NM_001080114:-51 BC010929:-53 ENST00000372066.7:-107 uc001kdr.4:-107 AJ133766:-107 NM_001080116:-156 AK297871:-209 AK300692:-210 ENST00000623056.3:-213 uc057uqg.1:-213 AK304760:-213 ENST00000429277.6:-271 NM_001171610:-271 uc010qmm.3:-271



TATA-Box annotation


Distance to TSS:57
Nearest PromoterID:NM_007078
Entrez ID:11155
Nearest Unigene:Hs.657271
Nearest Refseq:NM_007078
Nearest Ensembl:ENSG00000122367
Gene Name:LIM domain binding 3
Gene Alias:CMD1C
Gene Description:LIM domain binding 3
Gene Type:protein-coding
CpG%:0.03
GC%:0.646766
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):