Personal tools

TSS:Hg 1060.1

From referenceTSS

Revision as of 18:51, 10 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_1060.1
Species:human
Chr:chr1
TSS Classification:yes
Start:19312294
End:19312334
Strand:+
TSS Score:1
Start of the center position in the TSS region:19312314
End of the center position in the TSS region:19312315



Gene and protein annotation


Transcript_name:ENST00000375155.7 ENST00000375153.7 ENST00000469076.5 uc001bby.4 uc001bca.4 uc057cwq.1 AK130175 AK000327 AK125580 AK130171 AK172745
Distance:0
GeneID:54896
HGNC/MGI_ID:HGNC:26001
UniProt_ID:A0A024RA97 E9PL93 Q6ZP29
Gene_name:PQ loop repeat containing 2
Gene_symbol:PQLC2
Gene_synonyms:FLJ20320
Gene_source:HGNC:26001



Transcript annotation


Transcript_name:ENST00000375155.7 ENST00000375153.7 ENST00000469076.5 uc001bby.4 uc001bca.4 uc057cwq.1 AK130175 AK000327 AK125580 AK130171 AK172745
Distance:0
Num_trans:22
All_trans:ENST00000375155.7:0 ENST00000375153.7:0 ENST00000469076.5:0 uc001bby.4:0 uc001bca.4:0 uc057cwq.1:0 AK130175:0 AK000327:0 AK125580:0 AK130171:0 AK172745:0 ENST00000400548.6:7 uc001bbz.4:7 BC015324:7 BC021040:25 NM_001287531:-49 NM_017765:-49 NM_001040126:-49 NM_001040125:-49 NR_109848:-49 ENST00000497827.1:395 uc057cwr.1:395



TATA-Box annotation


Distance to TSS:68
Nearest PromoterID:NM_001040125
Entrez ID:54896
Nearest Unigene:Hs.647620
Nearest Refseq:NM_017765
Nearest Ensembl:ENSG00000040487
Gene Name:PQ loop repeat containing 2
Gene Alias:-
Gene Description:PQ loop repeat containing 2
Gene Type:protein-coding
CpG%:0.12
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):