Personal tools

TSS:Hg 100321.1

From referenceTSS

Revision as of 05:46, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_100321.1
Species:human
Chr:chr9
TSS Classification:yes
Start:26947222
End:26947272
Strand:-
TSS Score:1
Start of the center position in the TSS region:26947247
End of the center position in the TSS region:26947248



Gene and protein annotation


Transcript_name:ENST00000520884.5 uc003zqe.3 AF145020 AK002143
Distance:0
GeneID:9373
HGNC/MGI_ID:HGNC:9043
UniProt_ID:E5RIM3
Gene_name:phospholipase A2 activating protein
Gene_symbol:PLAA
Gene_synonyms:DOA1 FLJ11281 FLJ12699 PLA2P PLAP
Gene_source:HGNC:9043



Transcript annotation


Transcript_name:ENST00000520884.5 uc003zqe.3 AF145020 AK002143
Distance:0
Num_trans:17
All_trans:ENST00000520884.5:0 uc003zqe.3:0 AF145020:0 AK002143:0 AK001642:50 AK022761:75 BC032551:82 AB385043:175 EU176453:176 EU176795:176 KJ898010:177 ENST00000397292.7:-191 uc003zqd.4:-191 AL133608:-191 NM_001031689:-198 ENST00000523212.1:240 uc064slw.1:240



TATA-Box annotation


Distance to TSS:-65
Nearest PromoterID:NM_001099222
Entrez ID:80173
Nearest Unigene:Hs.145402
Nearest Refseq:NM_025103
Nearest Ensembl:ENSG00000096872
Gene Name:phospholipase A2 activating protein
Gene Alias:BBS20
Gene Description:intraflagellar transport 74
Gene Type:protein-coding
CpG%:0.105
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):