Basic information about the TSS
| TSS ID: | hg_101807.1 |
|---|
| Species: | human |
|---|
| Chr: | chr9 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 104928101 |
|---|
| End: | 104928112 |
|---|
| Strand: | - |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 104928106 |
|---|
| End of the center position in the TSS region: | 104928107 |
|---|
Gene and protein annotation
| Transcript_name: | AF285167 |
|---|
| Distance: | -19 |
|---|
| GeneID: | 19 |
|---|
| HGNC/MGI_ID: | HGNC:29 |
|---|
| UniProt_ID: | |
|---|
| |
| Gene_name: | ATP binding cassette subfamily A member 1 |
|---|
| Gene_symbol: | ABCA1 |
|---|
| Gene_synonyms: | TGD |
|---|
| Gene_source: | HGNC:29 |
|---|
|
Transcript annotation
| Transcript_name: | AF285167 |
|---|
| Distance: | -19 |
|---|
| Num_trans: | 15 |
|---|
| All_trans: | AF285167:-19 ENST00000423487.6:-27 ENST00000374733.1:-27 uc064uwp.1:-27 uc004bcm.4:-27 BC034824:-27 BC141816:-33 BC142693:-33 AK022254:-41 AK024328:-43 BC146856:46 ENST00000374736.7:-125 uc004bcl.4:-125 AF258627:-125 NM_005502:-134 |
|---|
TATA-Box annotation
| Distance to TSS: | 139 |
|---|
| Nearest PromoterID: | NM_005502 |
|---|
| Entrez ID: | 19 |
|---|
| Nearest Unigene: | Hs.659274 |
|---|
| Nearest Refseq: | NM_005502 |
|---|
| Nearest Ensembl: | ENSG00000165029 |
|---|
| Gene Name: | ATP binding cassette subfamily A member 1 |
|---|
| Gene Alias: | ABC-1 |
|---|
| Gene Description: | ATP binding cassette subfamily A member 1 |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.095 |
|---|
| GC%: | 0.636816 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-82(ATCTATAAAAGG,-,0.00)" |
|---|
