Personal tools

TSS:Hg 101902.1

From referenceTSS

Revision as of 11:02, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_101902.1
Species:human
Chr:chr9
TSS Classification:yes
Start:109429009
End:109429014
Strand:-
TSS Score:1
Start of the center position in the TSS region:109429011
End of the center position in the TSS region:109429012



Gene and protein annotation


Transcript_name:NM_001145372 NM_001145371
Distance:-29
GeneID:5774
HGNC/MGI_ID:HGNC:9655
UniProt_ID:Q8N4S3
Gene_name:"protein tyrosine phosphatase, non-receptor type 3"
Gene_symbol:PTPN3
Gene_synonyms:PTPH1
Gene_source:HGNC:9655



Transcript annotation


Transcript_name:NM_001145372 NM_001145371
Distance:-29
Num_trans:5
All_trans:NM_001145372:-29 NM_001145371:-29 AK316118:41 AK296388:41 AK296265:184



TATA-Box annotation


Distance to TSS:31
Nearest PromoterID:NM_001145371
Entrez ID:5774
Nearest Unigene:Hs.436429
Nearest Refseq:NM_002829
Nearest Ensembl:ENSG00000070159
Gene Name:"protein tyrosine phosphatase, non-receptor type 3"
Gene Alias:PTP-H1
Gene Description:"protein tyrosine phosphatase, non-receptor type 3"
Gene Type:protein-coding
CpG%:0.02
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"89(TTATTTAAAAGC,-,0.00)"