Personal tools

TSS:Hg 102613.1

From referenceTSS

Revision as of 13:24, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_102613.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127897400
End:127897411
Strand:-
TSS Score:1
Start of the center position in the TSS region:127897405
End of the center position in the TSS region:127897406



Gene and protein annotation


Transcript_name:ENST00000542456.5 ENST00000373141.5 NM_001287001 NM_001287003 uc011man.2 uc004bsn.3 AK057100
Distance:0
GeneID:30815
HGNC/MGI_ID:HGNC:23364
UniProt_ID:A0A024R8C6 F6SGE3 Q969X2
Gene_name:"ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6"
Gene_symbol:ST6GALNAC6
Gene_synonyms:ST6GALNACVI
Gene_source:HGNC:23364



Transcript annotation


Transcript_name:ENST00000542456.5 ENST00000373141.5 NM_001287001 NM_001287003 uc011man.2 uc004bsn.3 AK057100
Distance:0
Num_trans:8
All_trans:ENST00000542456.5:0 ENST00000373141.5:0 NM_001287001:0 NM_001287003:0 uc011man.2:0 uc004bsn.3:0 AK057100:0 AK300534:111



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001287003
Entrez ID:30815
Nearest Unigene:Hs.109672
Nearest Refseq:NM_013443
Nearest Ensembl:ENSG00000160408
Gene Name:"ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6"
Gene Alias:SIAT7-F
Gene Description:"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6"
Gene Type:protein-coding
CpG%:0.04
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):