Personal tools

TSS:Hg 102732.1

From referenceTSS

Revision as of 13:54, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_102732.1
Species:human
Chr:chr9
TSS Classification:yes
Start:129111260
End:129111271
Strand:-
TSS Score:1
Start of the center position in the TSS region:129111265
End of the center position in the TSS region:129111266



Gene and protein annotation


Transcript_name:ENST00000464290.5 uc064wji.1
Distance:72
GeneID:1384
HGNC/MGI_ID:HGNC:2342
UniProt_ID:
Gene_name:carnitine O-acetyltransferase
Gene_symbol:CRAT
Gene_synonyms:CAT1
Gene_source:HGNC:2342



Transcript annotation


Transcript_name:ENST00000464290.5 uc064wji.1
Distance:72
Num_trans:10
All_trans:ENST00000464290.5:72 uc064wji.1:72 ENST00000318080.6:457 uc004bxh.4:457 NM_000755:470 NM_001257363:470 ENST00000458362.5:479 uc064wjf.1:479 ENST00000441796.1:492 uc064wjk.1:492



TATA-Box annotation


Distance to TSS:-48
Nearest PromoterID:NM_178003
Entrez ID:5524
Nearest Unigene:Hs.400740
Nearest Refseq:NM_021131
Nearest Ensembl:ENSG00000119383
Gene Name:carnitine O-acetyltransferase
Gene Alias:PP2A
Gene Description:protein phosphatase 2 phosphatase activator
Gene Type:protein-coding
CpG%:0.145
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):