Personal tools

TSS:Mm 100674.1

From referenceTSS

Revision as of 20:19, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_100674.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:3409079
End:3409088
Strand:-
TSS Score:1
Start of the center position in the TSS region:3409083
End of the center position in the TSS region:3409084



Gene and protein annotation


Transcript_name:U88618 AB005131
Distance:-3
GeneID:16886
HGNC/MGI_ID:MGI:1197517
UniProt_ID:
Gene_name:LIM motif-containing protein kinase 2
Gene_symbol:Limk2
Gene_synonyms:A930024P04Rik LIM_kinase_2 Limk2a Limk2b whe
Gene_source:MGI:1197517



Transcript annotation


Transcript_name:U88618 AB005131
Distance:-3
Num_trans:13
All_trans:U88618:-3 AB005131:-3 AK161560:-49 uc056yjd.1:-60 AK042206:-60 AK044582:-63 BC007129:-69 ENSMUST00000101638.3:-86 ENSMUST00000125832.7:-86 AB008117:-86 ENSMUST00000145223.1:-101 NM_010718:-150 uc007hsu.2:-150



TATA-Box annotation


Distance to TSS:154
Nearest PromoterID:NM_010718
Entrez ID:16886
Nearest Unigene:Mm.124176
Nearest Refseq:NM_010718
Nearest Ensembl:ENSMUSG00000020451
Gene Name:LIM motif-containing protein kinase 2
Gene Alias:Limk-2
Gene Description:LIM motif-containing protein kinase 2
Gene Type:protein-coding
CpG%:0.095
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):