Personal tools

TSS:Mm 100676.1

From referenceTSS

Revision as of 20:19, 11 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_100676.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:3409162
End:3409195
Strand:-
TSS Score:1
Start of the center position in the TSS region:3409178
End of the center position in the TSS region:3409179



Gene and protein annotation


Transcript_name:ENSMUST00000101638.3 ENSMUST00000125832.7 ENSMUST00000145223.1 AB008117
Distance:0
GeneID:16886
HGNC/MGI_ID:MGI:1197517
UniProt_ID:O54785
Gene_name:LIM motif-containing protein kinase 2
Gene_symbol:Limk2
Gene_synonyms:A930024P04Rik LIM_kinase_2 Limk2a Limk2b whe
Gene_source:MGI:1197517



Transcript annotation


Transcript_name:ENSMUST00000101638.3 ENSMUST00000125832.7 ENSMUST00000145223.1 AB008117
Distance:0
Num_trans:13
All_trans:ENSMUST00000101638.3:0 ENSMUST00000125832.7:0 ENSMUST00000145223.1:0 AB008117:0 BC007129:6 AK044582:12 uc056yjd.1:15 AK042206:15 AK161560:26 NM_010718:-43 uc007hsu.2:-43 U88618:72 AB005131:72



TATA-Box annotation


Distance to TSS:59
Nearest PromoterID:NM_010718
Entrez ID:16886
Nearest Unigene:Mm.124176
Nearest Refseq:NM_010718
Nearest Ensembl:ENSMUSG00000020451
Gene Name:LIM motif-containing protein kinase 2
Gene Alias:Limk-2
Gene Description:LIM motif-containing protein kinase 2
Gene Type:protein-coding
CpG%:0.09
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):