Basic information about the TSS
| TSS ID: | mm_100730.1 |
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| Species: | mouse |
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| Chr: | chr11 |
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| TSS Classification: | yes |
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| Start: | 3931791 |
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| End: | 3931816 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 3931803 |
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| End of the center position in the TSS region: | 3931804 |
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Gene and protein annotation
| Transcript_name: | ENSMUST00000109988.1 |
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| Distance: | 0 |
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| GeneID: | 21452 |
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| HGNC/MGI_ID: | MGI:98534 |
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| UniProt_ID: | O88968 |
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| Gene_name: | transcobalamin 2 |
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| Gene_symbol: | Tcn2 |
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| Gene_synonyms: | Tcn-2 |
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| Gene_source: | MGI:98534 |
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Transcript annotation
| Transcript_name: | ENSMUST00000109988.1 |
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| Distance: | 0 |
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| Num_trans: | 22 |
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| All_trans: | ENSMUST00000109988.1:0 ENSMUST00000109992.7:3 ENSMUST00000109990.7:-144 NM_001130459:-145 uc007htx.2:-145 AK143761:-145 ENSMUST00000020710.10:-179 AK161618:-194 AK147176:-198 AF090686:209 AK196753:216 AK197212:216 AK133707:-226 ENSMUST00000109989.9:-228 NM_015749:-228 uc007hty.2:-228 AK170401:-249 ENSMUST00000109991.7:-262 NM_001130458:-262 uc007htz.2:-262 BC003720:291 ENSMUST00000109993.8:-343 |
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TATA-Box annotation
| Distance to TSS: | 157 |
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| Nearest PromoterID: | NM_001130459 |
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| Entrez ID: | 21452 |
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| Nearest Unigene: | Mm.20948 |
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| Nearest Refseq: | NM_015749 |
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| Nearest Ensembl: | ENSMUSG00000020432 |
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| Gene Name: | transcobalamin 2 |
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| Gene Alias: | AW208754 |
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| Gene Description: | transcobalamin 2 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.06 |
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| GC%: | 0.656716 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "51(GGGTCTTTAAAG,-,0.00),52(GGTCTTTAAAGC,-,0.00),53(GTCTTTAAAGCG,+,0.00)" |
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