Basic information about the TSS
| TSS ID: | mm_101288.1 |
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| Species: | mouse |
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| Chr: | chr11 |
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| TSS Classification: | yes |
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| Start: | 22001584 |
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| End: | 22001601 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 22001592 |
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| End of the center position in the TSS region: | 22001593 |
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Gene and protein annotation
| Transcript_name: | AK083671 |
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| Distance: | 0 |
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| GeneID: | 18423 |
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| HGNC/MGI_ID: | MGI:97450 |
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| UniProt_ID: | |
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| Gene_name: | orthodenticle homeobox 1 |
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| Gene_symbol: | Otx1 |
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| Gene_synonyms: | A730044F23Rik jv |
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| Gene_source: | MGI:97450 |
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Transcript annotation
| Transcript_name: | AK083671 |
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| Distance: | 0 |
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| Num_trans: | 13 |
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| All_trans: | AK083671:0 AK083434:-10 AK050758:-10 ENSMUST00000006071.13:-14 AK158588:-14 AK042975:-14 BC057105:24 NM_011023:-50 uc007idy.1:-50 uc007idz.1:-50 ENSMUST00000172395.2:-109 AK049430:-109 BC058354:424 |
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TATA-Box annotation
| Distance to TSS: | 58 |
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| Nearest PromoterID: | NM_011023 |
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| Entrez ID: | 18423 |
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| Nearest Unigene: | Mm.129663 |
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| Nearest Refseq: | NM_011023 |
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| Nearest Ensembl: | ENSMUSG00000005917 |
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| Gene Name: | orthodenticle homeobox 1 |
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| Gene Alias: | A730044F23Rik |
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| Gene Description: | orthodenticle homeobox 1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.045 |
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| GC%: | 0.502488 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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