Personal tools

TSS:Hg 105865.1

From referenceTSS

Revision as of 05:59, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_105865.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80413817
End:80413850
Strand:+
TSS Score:1
Start of the center position in the TSS region:80413833
End of the center position in the TSS region:80413834



Gene and protein annotation


Transcript_name:ENST00000372187.9 NM_001243782 NM_001243778 uc001kce.5 AK126292 AK225387
Distance:0
GeneID:84293
HGNC/MGI_ID:HGNC:28651
UniProt_ID:Q9BRX8
Gene_name:family with sequence similarity 213 member A
Gene_symbol:FAM213A
Gene_synonyms:MGC4248 PAMM
Gene_source:HGNC:28651



Transcript annotation


Transcript_name:ENST00000372187.9 NM_001243782 NM_001243778 uc001kce.5 AK126292 AK225387
Distance:0
Num_trans:8
All_trans:ENST00000372187.9:0 NM_001243782:0 NM_001243778:0 uc001kce.5:0 AK126292:0 AK225387:0 BC005871:7 BC071938:7



TATA-Box annotation


Distance to TSS:15
Nearest PromoterID:NM_001243782
Entrez ID:84293
Nearest Unigene:Hs.500333
Nearest Refseq:NM_032333
Nearest Ensembl:ENSG00000122378
Gene Name:family with sequence similarity 213 member A
Gene Alias:C10orf58
Gene Description:family with sequence similarity 213 member A
Gene Type:protein-coding
CpG%:0.03
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):