Personal tools

TSS:Mm 100217.1

From referenceTSS

Revision as of 12:31, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_100217.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117076767
End:117076840
Strand:+
TSS Score:1
Start of the center position in the TSS region:117076803
End of the center position in the TSS region:117076804



Gene and protein annotation


Transcript_name:ENSMUST00000145438.1 ENSMUST00000149822.1 ENSMUST00000182811.1 NR_027059 uc007mmx.2 AK012687 AK171830
Distance:0
GeneID:76972
HGNC/MGI_ID:MGI:1924222
UniProt_ID:
Gene_name:small nucleolar RNA host gene 20
Gene_symbol:Snhg20
Gene_synonyms:2810008D09Rik
Gene_source:MGI:1924222



Transcript annotation


Transcript_name:ENSMUST00000145438.1 ENSMUST00000149822.1 ENSMUST00000182811.1 NR_027059 uc007mmx.2 AK012687 AK171830
Distance:0
Num_trans:9
All_trans:ENSMUST00000145438.1:0 ENSMUST00000149822.1:0 ENSMUST00000182811.1:0 NR_027059:0 uc007mmx.2:0 AK012687:0 AK171830:0 BC037520:23 ENSMUST00000157904.1:403



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:NR_027059
Entrez ID:76972
Nearest Unigene:Mm.309167
Nearest Refseq:NR_027059
Nearest Ensembl:ENSMUSG00000086859
Gene Name:small nucleolar RNA host gene 20
Gene Alias:2810008D09Rik
Gene Description:small nucleolar RNA host gene 20
Gene Type:ncRNA
CpG%:0.105
GC%:0.646766
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):