Personal tools

TSS:Mm 100299.1

From referenceTSS

Revision as of 12:39, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_100299.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117832286
End:117832299
Strand:+
TSS Score:1
Start of the center position in the TSS region:117832292
End of the center position in the TSS region:117832293



Gene and protein annotation


Transcript_name:ENSMUST00000131268.1
Distance:-14
GeneID:71562
HGNC/MGI_ID:MGI:2448704
UniProt_ID:
Gene_name:arylformamidase
Gene_symbol:Afmid
Gene_synonyms:9030621K19Rik Kf formylase formylkynureninase kynurenine_formamidase
Gene_source:MGI:2448704



Transcript annotation


Transcript_name:ENSMUST00000131268.1
Distance:-14
Num_trans:5
All_trans:ENSMUST00000131268.1:-14 ENSMUST00000148016.7:-57 uc007moc.1:-57 AK018563:-57 ENSMUST00000139945.7:-183



TATA-Box annotation


Distance to TSS:-6279
Nearest PromoterID:NM_009387
Entrez ID:21877
Nearest Unigene:Mm.2661
Nearest Refseq:NM_009387
Nearest Ensembl:ENSMUSG00000025574
Gene Name:arylformamidase
Gene Alias:D530002A18Rik
Gene Description:thymidine kinase 1
Gene Type:protein-coding
CpG%:0.04
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):