Personal tools

TSS:Hg 53378.1

From referenceTSS

Revision as of 20:45, 13 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_53378.1
Species:human
Chr:chr4
TSS Classification:yes
Start:102345062
End:102345083
Strand:-
TSS Score:1
Start of the center position in the TSS region:102345072
End of the center position in the TSS region:102345073



Gene and protein annotation


Transcript_name:ENST00000394833.6 uc003hwb.2 AB040120
Distance:-56
GeneID:64116
HGNC/MGI_ID:HGNC:20862
UniProt_ID:A0A024RDG0 Q9C0K1
Gene_name:solute carrier family 39 member 8
Gene_symbol:SLC39A8
Gene_synonyms:BIGM103
Gene_source:HGNC:20862



Transcript annotation


Transcript_name:ENST00000394833.6 uc003hwb.2 AB040120
Distance:-56
Num_trans:21
All_trans:ENST00000394833.6:-56 uc003hwb.2:-56 AB040120:-56 NM_022154:-108 ENST00000424970.6:-122 uc011ceo.2:-122 AK304274:-122 NM_001135147:-170 ENST00000514000.5:-354 uc062yoa.1:-354 AF193052:-366 ENST00000356736.4:-391 uc003hwc.3:-391 BC012125:-391 ENST00000512657.5:-399 uc062yob.1:-399 DQ892212:401 KJ894532:401 DQ895407:401 CU680230:401 NM_001135146:-415



TATA-Box annotation


Distance to TSS:118
Nearest PromoterID:NM_022154
Entrez ID:64116
Nearest Unigene:Hs.288034
Nearest Refseq:NM_022154
Nearest Ensembl:ENSG00000138821
Gene Name:solute carrier family 39 member 8
Gene Alias:BIGM103
Gene Description:solute carrier family 39 member 8
Gene Type:protein-coding
CpG%:0.06
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):