rfhg_10008.1

Basic information about the TSS

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TSS ID: rfhg_10008.1 Species: human Chr: chr1		Start: 101025851 End: 101025915 Strand: +
Source datasets	PRJNA597322|PRJNA401781|PRJNA4843412|PRJNA615891|DRA013844 |PRJNA548673|PRJDB5282
Protocol	STRIPE-seq|CAGE|RAMPAGE|NETCAGE|SLIC_CAGE|oligo_capping |ReCappable-seq|C1CAGE
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2204050,EH38E1372062)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: BX538249:0 GeneID: 102606465 HGNC/MGI_ID: HGNC:53720 UniProt_ID: Nearer transcript ids and distances: ENST00000663958.1:-1 ENST00000446527.5:4 NR_109849.1:-5 ENST00000451213.2:-7 ENST00000669687.1:36 ENST00000656224.1:124 view more...

Gene_name: DPH5 divergent transcript Gene_symbol: DPH5-DT Gene_synonyms: Gene_source: HGNC:53720

TATA-Box annotation

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Distance to TSS:	37
Nearest PromoterID:	NR_109849
Entrez ID:	102606465
Nearest Unigene:	Hs.593669
Nearest Refseq:	NR_109849
Nearest Ensembl:
Gene Name:	DPH5 divergent transcript
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.078125
GC%:	0.723077
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.