rfhg_100153.1

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Basic information about the TSS


TSS ID:rfhg_100153.1
Species:human
Chr:chr7
Start:130913229
End:130913231
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D4031168,EH38E2590693)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000418546.1:32
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000447307.5:53
  • ENST00000432045.6:-79
  • NR_110473.1:-79
  • NR_034120.1:-79
  • NR_110472.1:-79
  • AK095549:-79
  • LP896493:-79
  • GU321462:98
  • MG322760:122
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:80
Nearest PromoterID:NR_034120
Entrez ID:378805
Nearest Unigene:Hs.150556
Nearest Refseq:NM_001085379
Nearest Ensembl:ENSG00000231721
Gene Name:
Gene Alias:LincRNA-Pint|MKLN1-AS1|PINT
Gene Type:ncRNA
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):