rfhg_100250.1

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Basic information about the TSS


TSS ID:rfhg_100250.1
Species:human
Chr:chr7
Start:131107320
End:131107333
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D4031419,EH38E2590937)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF361179:10
MA596756:10
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF361180:-196
  • MA596757:-196
  • ENST00000644804.1:285
  • ENST00000433079.5:290
  • NR_024153.2:290
  • BC039420:290
  • AL713664:-467
  • ENST00000644188.1:-475
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-296
Nearest PromoterID:NR_024153
Entrez ID:378805
Nearest Unigene:Hs.150556
Nearest Refseq:NM_001085379
Nearest Ensembl:ENSG00000231721
Gene Name:
Gene Alias:LincRNA-Pint|MKLN1-AS1|PINT
Gene Type:ncRNA
CpG%:0.000000
GC%:0.285714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):