rfhg_10026.1

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Basic information about the TSS


TSS ID:rfhg_10026.1
Species:human
Chr:chr1
Start:101236752
End:101236773
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2204248,EH38E1372218)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF206314:-13
MA441891:-13
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000475821.2:92
  • ENST00000561748.2:126
  • NM_001320730.2:126
  • NR_174348.1:126
  • NR_174350.1:126
  • AK297005:130
  • ENST00000305352.7:246
  • NM_001400.5:246
  • NR_174346.1:246
  • NR_174345.1:246
  • NR_174349.1:246
  • NR_174347.1:246
  • AK312493:246
  • BC018650:246
  • M31210:247
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NM_001400
Entrez ID:1901
Nearest Unigene:Hs.154210
Nearest Refseq:NM_001400
Nearest Ensembl:ENSG00000170989
Gene Name:
Gene Alias:CD363|CHEDG1|D1S3362|ECGF1|EDG-1|EDG1|S1P1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):