rfhg_100261.1

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Basic information about the TSS


TSS ID:rfhg_100261.1
Species:human
Chr:chr7
Start:131109971
End:131110048
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4031427,EH38E2590945)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_170175.1:46
NR_170176.1:46
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • NR_109855.1:55
  • NR_109850.1:55
  • NR_109851.1:55
  • NR_109852.1:55
  • NR_015431.2:55
  • NR_109853.1:55
  • NR_109854.1:55
  • AK125651:77
  • ENST00000647102.1:-113
  • ENST00000643866.1:-113
  • ENST00000644432.1:-113
  • ENST00000643779.1:-113
  • ENST00000643452.1:-113
  • ENST00000451786.5:-128
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-85
Nearest PromoterID:NM_001145354
Entrez ID:4289
Nearest Unigene:Hs.44693
Nearest Refseq:NM_013255
Nearest Ensembl:ENSG00000128585
Gene Name:
Gene Alias:TWA2
Gene Type:protein-coding
CpG%:0.051948
GC%:0.602564
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):