rfhg_100533.1

Basic information about the TSS

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TSS ID: rfhg_100533.1 Species: human Chr: chr7		Start: 134986484 End: 134986573 Strand: +
Source datasets	PRJNA401781|PRJNA548673|PRJNA615891|PRJNA4843412|DRA013844
Protocol	CAGE|RAMPAGE|oligo_capping|ReCappable-seq|SLIC_CAGE |TIF-seq2|NETCAGE
TSS cluster detected*	9

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D4034995,EH38E2593251)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000436302.6:0 ENST00000275763.10:0 ENST00000435976.6:0 ENST00000455283.2:0 ENST00000476700.5:0 ENST00000494702.2:0 AK302827:0 BC030651:0 AL832281:0 AK023045:0 AK311252:0 GeneID: 340351 HGNC/MGI_ID: HGNC:27981 UniProt_ID: F8W6Y5 F8W7R4 Q8NEM8 Nearer transcript ids and distances: ENST00000470839.1:31

Gene_name: AGBL carboxypeptidase 3 Gene_symbol: AGBL3 Gene_synonyms: CCP3 MGC32955 Gene_source: HGNC:27981

TATA-Box annotation

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Distance to TSS:	20
Nearest PromoterID:	NM_001367813
Entrez ID:	340351
Nearest Unigene:	Hs.648616
Nearest Refseq:	NM_178563
Nearest Ensembl:	ENSG00000146856
Gene Name:	AGBL carboxypeptidase 3
Gene Alias:	CCP3
Gene Type:	protein-coding
CpG%:	0.089888
GC%:	0.633333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.