rfhg_100870.1

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Basic information about the TSS


TSS ID:rfhg_100870.1
Species:human
Chr:chr7
Start:139523668
End:139523759
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4038524,EH38E2595654)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000422142.7:0
GeneID:154790
HGNC/MGI_ID:HGNC:21969
UniProt_ID:P0C7M8
Nearer transcript ids and distances:
  • ENST00000521281.1:323
Gene_name:C-type lectin domain family 2 member L
Gene_symbol:CLEC2L
Gene_synonyms:FLJ32986
Gene_source:HGNC:21969



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_001080511
Entrez ID:154790
Nearest Unigene:Hs.57806
Nearest Refseq:NM_001080511
Nearest Ensembl:ENSG00000236279
Gene Name:C-type lectin domain family 2 member L
Gene Alias:-
Gene Type:protein-coding
CpG%:0.153846
GC%:0.815217
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.