rfhg_100918.1

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Basic information about the TSS


TSS ID:rfhg_100918.1
Species:human
Chr:chr7
Start:139778057
End:139778061
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4038833,EH38E2595915)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213901:43
MA449478:43
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000406875.8:59
  • NM_022740.5:59
  • NM_001113239.3:59
  • ENST00000428878.6:279
  • AF326592:279
  • AF208291:339
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-61
Nearest PromoterID:NM_001113239
Entrez ID:28996
Nearest Unigene:Hs.731417
Nearest Refseq:NM_022740
Nearest Ensembl:ENSG00000064393
Gene Name:
Gene Alias:PRO0593
Gene Type:protein-coding
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):