rfhg_101019.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_101019.1
Species:human
Chr:chr7
Start:140924131
End:140924146
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4039854,EH38E2596669)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001378472.1:-122
NM_001378473.1:-122
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:791
    Nearest PromoterID:NM_004333
    Entrez ID:673
    Nearest Unigene:Hs.324250
    Nearest Refseq:NM_004333
    Nearest Ensembl:ENSG00000157764
    Gene Name:
    Gene Alias:B-RAF1|B-raf|BRAF1|NS7|RAFB1
    Gene Type:protein-coding
    CpG%:0.133333
    GC%:0.437500
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):