rfhg_101154.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -49210 |
|---|---|
| Nearest PromoterID: | NR_036483 |
| Entrez ID: | 207147 |
| Nearest Unigene: | Hs.604069 |
| Nearest Refseq: | NR_036483 |
| Nearest Ensembl: | ENSG00000186163 |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | pseudo |
| CpG%: | 0.083333 |
| GC%: | 0.692308 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "JF731155:1 HM236508:1 HM236676:1 HM467843:1 HM467856:1 JF731144:1 HM236515:1 HM236670:1 HM236779:1 HM467902:1 HM467903:1 JF731148:1 JF731154:1 HM236539:2 JF731147:2 HM467879:4 AY751916:4 DQ473367:4 HM236541:4 HM467844:4 HM467852:4 HM467855:4 HM467860:4 JF731157:4 DQ473364:4 DQ473366:4 AY751846:4 HM236545:4 HM236780:4 HM467904:4 JF731156:4 JF731160:4 JF731161:4 AY751921:7 AY751898:7 HM236511:7 HM236543:7 DQ875563:-8 MG789043:-8 MG789211:-8 MG789501:-8 MG789575:-8 MG789827:-8 MG789881:-8 MG789906:-8 MG790362:-8 MG790713:-8 MG790776:-8 MG790956:-8 MG790959:-8 MG791017:-8 MG791044:-8 MG791144:-8 MG791169:-8 MG791200:-8 MG791508:-8 KM004205:-8 KM004550:-8 KM004603:-8 KM004618:-8 KM004623:-8 KM004638:-8 KM004640:-8 KM004654:-8 KM004690:-8 KM004712:-8 KM004739:-8 KM004741:-8 MG789022:-8 MG789190:-8 MG789205:-8 MG789222:-8 MG789386:-8 MG789458:-8 MG789484:-8 MG789532:-8 MG789995:-8 MG790130:-8 MG790148:-8 MG790157:-8 MG790304:-8 MG790387:-8 MG790486:-8 MG790501:-8 MG790517:-8 MG790560:-8 MG790809:-8 MG790893:-8 MG790932:-8 MG791015:-8 MG791067:-8 MG791277:-8 MG791336:-8 MG791392:-8 MG791570:-8 MG791583:-8 MG791614:-8 MG791627:-8 MG791669:-8 MG791758:-8 KM004171:-8 KM004245:-8 KM004532:-8 KM004533:-8 KM004584:-8 KM004593:-8 KM004610:-8 KM004624:-8 KM004628:-8 KM004642:-8 KM004683:-8 KM004700:-8 KM004715:-8 KM004750:-8 KM004752:-8 KM004761:-8 MK088533:-8 MK088535:-8 MK088536:-8 MK088537:-8 MK088554:-8 MK088555:-8 MK088558:-8 MK088534:-8 MK088557:-8 KM004195:-9 KM004192:-9 KM004622:-9 KM004648:-9 KM004660:-9 KM004721:-9 AY751835:10 HM236677:10 AY611539:-11 AF009791:-11 MG790801:12 MG790551:12 MG790306:12 S64081:13 JF731228:16 JF731183:16 JF731187:16 JF731232:16 AF071469:-17 X86128:-17 AF041067:-17 AF327910:19 AF018168:-20 AY611537:-26 KX074665:33 KX076040:33 KX076116:33 KX076933:33 KX074264:33 KX075149:33 KX074321:33 KX074427:33 KX074916:33 AY848704:-35 GQ502871:-35 GQ502880:-35 AY848707:-35 AY848705:-35 KX076290:36 DQ875555:-38 DQ864993:-38 EF592023:-38 EF567072:-38 S61991:-40 GQ502874:-41 EF591994:-41 AY006185:42 AY006199:42 AY006237:42 AY006330:42 AY006176:42 AY006198:42 AY006187:42 AY006181:42 AY006190:42 AY006191:42 AY006192:42 AY006332:42 AY006178:42 AY006189:42 AY006177:42 AY006182:42 EF591999:-43 AY006250:43 AY006275:43 AY006242:43 AY006254:43 AY006251:43 AY006253:43 AY006252:43 AY006282:43 AY006280:43 GQ502885:-44 AF272740:-50 EF592019:-50 GQ502894:-50 EF592003:-50 EF591997:-50 EF592000:-50 GQ502878:-50 GQ502879:-50 X92773:-51 Z77833:-51 X92789:-51 EF592029:-51 EF591998:-51 AB305912:-90 M13848:-90 AB977675:-90 AB977780:-94 S77831:-96 JN695578:-98 AB305895:-143 AB305953:-150 AF430661:-152 AB977938:-154 AB978249:-154 AB977832:-154 AB977778:-154 AB977799:-154 AB978089:-154 AB977661:-154 AB977662:-154 AF430653:-160 AF430660:-162 AF430669:-162 AF430675:-162 AF430648:-162 AF430649:-162 AF430651:-162 AF430655:-162 AF430662:-162 AF430663:-162 AF430664:-162 AF430665:-162 AF430666:-162 AF430674:-162 AF430679:-162 AB978065:-167 AB305902:-168 AB305890:-175 M13849:-176 JF834317:-194 JF834315:-194 JF834319:-194 AB977964:-205 AB978082:-209 AB977728:-221 AB305829:-338 AB978233:-346 M14271:-370 BC030533:-376 GQ502864:-378 KJ026959:-378 X58328:-378 X04927:-378 AF272741:-378 GU122927:-378 AB305898:-385 AF020652:-386 AF020653:-386 AB977605:-390 AB306137:-403 AB306190:-403 AB978267:-403 AB749877:-406 AB306166:-407 AB305932:-407 AB306245:-407 AB977598:-407 LR800298:-407 AB977737:-408 LR800296:-408 AB305923:-409 AB749823:-409 AB978226:-409 M97715:-409 AB978099:-410 AB749851:-411 AB305818:-413 LR800297:-413 AB306259:-414 AB978001:-418 AB749899:-419 AB305954:-423 AB306261:-424 AB977560:-425 AB978201:-426 AB306233:-428 AB305870:-428 LR800299:-428 M97705:-429 AB305845:-429 AB749885:-429 LR800295:-429 AB978225:-432 AB749895:-435 AB749835:-435 AB978019:-435 AB978212:-435 AB978006:-435 AB749871:-436 AB305917:-437 AB305936:-439 AB305964:-440 AB749857:-443 AB749839:-447" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.