rfhg_101160.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4040898,EH38E2597341) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -73172 |
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| Nearest PromoterID: | NR_036483 |
| Entrez ID: | 207147 |
| Nearest Unigene: | Hs.604069 |
| Nearest Refseq: | NR_036483 |
| Nearest Ensembl: | ENSG00000186163 |
| Gene Name: | T cell receptor beta variable 4-2 |
| Gene Alias: | - |
| Gene Type: | pseudo |
| CpG%: | 0.000000 |
| GC%: | 0.583333 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "U47743:9 AB305937:31 U47744:69 AB977853:75 AB977557:75 AB977820:75 AB305853:75 AB977753:75 AB977910:75 X58812:90 AB305807:90 AB305935:101 L06888:105 D13083:114 X62856:127 AB978075:127 AB978139:-191 AB977578:276 AB305990:303 X57616:323 X57617:323 X57618:323 AB977784:347 AB977904:355 S82065:371 AB977851:392 AB977651:392 AB977825:394 DQ473378:395 DQ473379:395 DQ473384:395 DQ473388:395 AB977983:400 M13856:455 KX076483:456 KX076348:459 KX075549:464 KX076278:464 MG192843:467 MG193115:467 MG192620:467 MG192778:467 MG192820:467 MG192935:467 MG193117:467 MG193113:467 MG192918:467 MG192990:467 AF428128:467 MG192897:467 AF428129:467 AF428126:467 MG789114:467 MG789197:467 MG789264:467 MG789535:467 MG789565:467 MG789625:467 MG789654:467 MG790034:467 MG790047:467 MG790778:467 KM004232:467 EU340842:467 AY123173:467 AY123179:467 AY123182:467 AY123185:467 MG192709:467 MG192767:467 MG192821:467 MG192939:467 MG192686:467 AY123172:467 AY123178:467 AY123181:467 AY123184:467 MG192552:467 MG192708:467 MG192837:467 MG192851:467 MG192978:467 MG193105:467 AY123186:467 MG192667:467 MG192817:467 MG192735:467 MG192934:467 MG192975:467 MG193009:467 MG193072:467 MG193091:467 MG789081:467 MG789096:467 MG789103:467 MG789296:467 MG789344:467 MG789384:467 MG789433:467 MG789611:467 MG789798:467 MG789869:467 MG790116:467 MG790253:467 MG790409:467 MG790504:467 MG790979:467 KM004036:467 KM004228:467 KM004692:467 AY292265:467 AY292266:467 MK088556:467 AY190092:470 AY190098:471 KX074565:473 KX074893:473 KX075900:473 KX076646:473 KX076149:473 KX076045:473 KX076074:473 KX074314:473 KX076217:473 KX076372:473 KX075161:473 KX075750:473 KX076349:473 KX076351:473 KX076354:473 KX076376:473 KX077046:473 KX074437:473 KX074579:473 KX074720:473 KX075318:473 KX076170:473 HM236761:473 GQ502886:473 KX075139:474 KX075575:474 HM236505:476 AY751922:476 HM236582:476 HM236567:479 HM236706:479 HM236506:482 L34729:482 L34726:485 U39140:485 HM236556:488 HM236719:488 KX076153:491 U39133:497 AB978015:500 KX076936:500" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.