rfhg_101172.1

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Basic information about the TSS


TSS ID:rfhg_101172.1
Species:human
Chr:chr7
Start:142352758
End:142352766
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D4040908,EH38E2597350)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB977640:52
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB306251:53
  • AB305910:53
  • AB306178:53
  • AB305810:53
  • AB978176:54
  • AB749825:54
  • AB978005:54
  • LR800335:54
  • KT207831:55
  • AB978252:56
  • AB360847:61
  • AB977696:64
  • AB306204:70
  • AB305926:71
  • AB977503:72
  • AB305904:73
  • AB977685:76
  • AB977999:78
  • BC108321:79
  • AB977889:83
  • AB305852:92
  • AB305977:96
  • KJ902484:98
  • AF043184:100
  • M15221:100
  • AB305906:100
  • M14262:100
  • AF272743:100
  • AY373825:100
  • X60096:100
  • AB305848:102
  • AB978077:105
  • X58326:112
  • M27387:285
  • U51447:300
  • AY190109:365
  • DQ473373:372
  • DQ473377:372
  • DQ473372:372
  • DQ473376:372
  • DQ473371:372
  • DQ473374:372
  • DQ473389:372
  • JF731168:380
  • JF731169:380
  • JF731167:381
  • L34720:390
  • AB977937:392
  • AB977946:392
  • KX075105:400
  • KX075184:400
  • KX075378:400
  • KX075759:400
  • KX076326:400
  • KX076730:400
  • KX074909:400
  • KX075093:400
  • KX075508:400
  • KX075820:400
  • KX075962:400
  • KX076097:400
  • KX077050:400
  • KX077089:400
  • KX076658:400
  • KX076816:400
  • KX077162:400
  • KX074752:400
  • KX076315:400
  • KX076169:400
  • KX074465:400
  • KX074476:400
  • KX074554:400
  • KX075449:400
  • KX075713:400
  • KX075928:400
  • KX076360:400
  • KX074910:400
  • KX075251:400
  • KX075981:400
  • KX076890:400
  • KX074396:400
  • KX074509:400
  • KX074912:400
  • KX075110:400
  • KX075430:400
  • KX075640:400
  • KX075785:400
  • KX076285:400
  • KX074626:400
  • KX075858:400
  • KX076281:400
  • KX074400:400
  • KX075947:400
  • KX076734:400
  • KX076061:406
  • KX077094:406
  • KX076143:406
  • Z23046:420
  • AB977677:423
  • JF731214:432
  • JF731230:432
  • JF731231:432
  • JF731213:432
  • JF731215:432
  • JF731216:432
  • JF731226:432
  • JF731227:432
  • KX075156:440
  • KX076637:440
  • X58327:447
  • KX076270:454
  • L10119:459
  • AJ296361:461
  • MG789858:484
  • MG790050:484
  • KX075624:489
  • MG789710:491
  • AJ296364:498
  • JF731166:498
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-80513
Nearest PromoterID:NR_036483
Entrez ID:207147
Nearest Unigene:Hs.604069
Nearest Refseq:NR_036483
Nearest Ensembl:ENSG00000186163
Gene Name:
Gene Alias:-
Gene Type:pseudo
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "AB306251:53 AB305910:53 AB306178:53 AB305810:53 AB978176:54 AB749825:54 AB978005:54 LR800335:54 KT207831:55 AB978252:56 AB360847:61 AB977696:64 AB306204:70 AB305926:71 AB977503:72 AB305904:73 AB977685:76 AB977999:78 BC108321:79 AB977889:83 AB305852:92 AB305977:96 KJ902484:98 AF043184:100 M15221:100 AB305906:100 M14262:100 AF272743:100 AY373825:100 X60096:100 AB305848:102 AB978077:105 X58326:112 M27387:285 U51447:300 AY190109:365 DQ473373:372 DQ473377:372 DQ473372:372 DQ473376:372 DQ473371:372 DQ473374:372 DQ473389:372 JF731168:380 JF731169:380 JF731167:381 L34720:390 AB977937:392 AB977946:392 KX075105:400 KX075184:400 KX075378:400 KX075759:400 KX076326:400 KX076730:400 KX074909:400 KX075093:400 KX075508:400 KX075820:400 KX075962:400 KX076097:400 KX077050:400 KX077089:400 KX076658:400 KX076816:400 KX077162:400 KX074752:400 KX076315:400 KX076169:400 KX074465:400 KX074476:400 KX074554:400 KX075449:400 KX075713:400 KX075928:400 KX076360:400 KX074910:400 KX075251:400 KX075981:400 KX076890:400 KX074396:400 KX074509:400 KX074912:400 KX075110:400 KX075430:400 KX075640:400 KX075785:400 KX076285:400 KX074626:400 KX075858:400 KX076281:400 KX074400:400 KX075947:400 KX076734:400 KX076061:406 KX077094:406 KX076143:406 Z23046:420 AB977677:423 JF731214:432 JF731230:432 JF731231:432 JF731213:432 JF731215:432 JF731216:432 JF731226:432 JF731227:432 KX075156:440 KX076637:440 X58327:447 KX076270:454 L10119:459 AJ296361:461 MG789858:484 MG790050:484 KX075624:489 MG789710:491 AJ296364:498 JF731166:498" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.