rfhg_101200.1

Basic information about the TSS

TSS ID:	rfhg_101200.1
Species:	human
Chr:	chr7

Start:	142407664
End:	142407682
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000390367.3:0
GeneID:
HGNC/MGI_ID:	HGNC:12180
UniProt_ID:	A0A0K0K1C0
Nearer transcript ids and distances:	AB360845:8 AB977896:154 AB978027:256 KM004200:361 MG790069:363 MG789315:363 MG791698:363 MG192771:363 MG192634:363 MG193119:363 MG790840:363 JF731207:366 KX075780:384 KX075487:384 KX076399:384 KX075959:384 KX076984:384 KX074914:384 KX074786:388 KX075594:388 KX077026:390 KX074913:398 HM568194:399 AB076784:432 AJ224258:438 AF441098:438 AJ224254:438 view more...

Gene_name:	T cell receptor beta variable 11-1
Gene_symbol:	TRBV11-1
Gene_synonyms:	TCRBV11S1 TCRBV21S1 TRBV111
Gene_source:	HGNC:12180

TATA-Box annotation

Distance to TSS:	-66854
Nearest PromoterID:	NR_162121
Entrez ID:	113839523
Nearest Unigene:
Nearest Refseq:	NR_162121
Nearest Ensembl:
Gene Name:	T cell receptor beta variable 11-1
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.684211
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "AB360845:8 AB977896:154 AB978027:256 KM004200:361 MG790069:363 MG789315:363 MG791698:363 MG192771:363 MG192634:363 MG193119:363 MG790840:363 JF731207:366 KX075780:384 KX075487:384 KX076399:384 KX075959:384 KX076984:384 KX074914:384 KX074786:388 KX075594:388 KX077026:390 KX074913:398 HM568194:399 AB076784:432 AJ224258:438 AF441098:438 AJ224254:438" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.