rfhg_101212.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4041008,EH38E2597438) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -23604 |
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| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.538462 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AB977663:3 ENST00000390368.2:18 AB306222:18 AB306240:18 AB977897:18 AB977849:18 AB978186:18 AB978039:18 AB977993:18 AB977994:18 AB977752:19 AB977768:20 AB978151:-29 AB977523:30 AB978088:30 BC110303:33 AB360849:35 AB977813:40 AB978143:44 AB977927:45 AB978129:45 AB978270:46 AB978142:47 AB306243:50 AB978228:53 AB978181:76 KJ905457:82 X04932:84 AJ004872:84 Z26594:84 AF043179:84 AB977567:88 M13863:104 AB306227:221 AB978071:252 AB977569:297 AY190105:298 KX076590:298 KX076265:298 KX074391:298 AB978144:298 AB978128:298 AY190104:298 KX076367:298 KX076994:298 AB978046:298 AB977892:298 AB977895:298 AB977736:298 AB977572:298 KX076600:300 KX074580:300 KX076039:303 KX076854:306 KX077035:320 MK764544:326 JF923742:338 AB977833:352 AB977783:356 AB977959:356 AB977789:356 AB978104:356 AB977903:358 AB978266:387 AF102880:395 AF428134:398 AF428133:398 DQ875572:401 DQ875553:401 DQ875585:401 DQ875548:401 DQ875589:404 DQ875586:407 AB977782:407 KX076721:416 KX076241:417 KX076571:417 KX075092:417 KX075202:417 KX075288:417 KX076106:417 KX076218:417 KX076554:417 KX076701:417 KX076712:417 KX076174:417 KX076562:417 KX074851:417 KX074995:417 KX076862:417 KX076888:417 KX076894:417 KX076899:417 KX076971:417 KX077000:417 KX074877:417 KX075301:417 KX075510:417 KX076924:417 KX076983:417 KX076859:422 M90473:422 KM004211:426 KM004745:427 MG789375:428 MG790209:428 KM004554:428 KM004562:428 KM004714:428 KM004749:428 KM004116:428 KM004262:428 KM004265:428 HM236709:431 HM236593:431 HM467881:431 KX075218:434 AY751933:434 AY751934:434 HM236609:434 HM236728:434 HM236594:434 HM236607:434 EU325978:434 KX076515:435 KX075317:435 KX076477:435 KX075796:435 KX076475:435 KX077018:435 AF395793:435 KX074397:435 KX075067:435 KX076941:435 KX076931:435 KX077009:435 KX077032:435 KX077091:435 KX076478:435 HM467882:437 HM236591:437 HM236592:437 HM467884:437 HM467885:437 EU325970:437 AY751902:440 HM236525:440 HM236730:440 AY751862:440 HM236797:440 HM467883:440 MG789001:442 MG789148:442 MG789157:442 MG789226:442 MG789247:442 MG789250:442 MG789366:442 MG789755:442 MG789829:442 MG789997:442 MG790075:442 MG790092:442 MG790170:442 MG790190:442 MG790238:442 MG790527:442 MG790572:442 MG790780:442 MG791130:442 MG791156:442 MG789005:442 MG789453:442 MG789521:442 MG789549:442 MG789886:442 MG790245:442 MG790308:442 MG790366:442 MG790431:442 MG790578:442 MG790754:442 MG790836:442 MG790880:442 MG790927:442 MG791100:442 MG791180:442 MG791378:442 MG791511:442 AJ296366:443 HM236732:443 HM236524:443 HM236619:446 HM236621:446 HM236628:446 HM236634:446 HM236636:446 HM236649:446 HM236523:446 MG790975:449 HM236731:449 KX075965:457 KX074422:457 KX074850:458 KX074899:458 HM236578:460 AY006107:473 U55152:488 U55092:488 AF079044:491 AF084011:494 AF084014:494 AF084019:494 U30188:500" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.