rfhg_101215.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4041008,EH38E2597438) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -23531 |
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| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.250000 |
| GC%: | 0.800000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AB978228:-12 KJ905457:13 AB306243:-15 X04932:15 AJ004872:15 Z26594:15 AF043179:15 AB978142:-18 AB978270:-19 AB977567:19 AB977927:-20 AB978129:-20 AB978143:-21 AB977813:-25 AB360849:-30 BC110303:-32 AB977523:-35 AB978088:-35 M13863:35 AB977768:-45 AB977752:-46 ENST00000390368.2:-47 AB306222:-47 AB306240:-47 AB977897:-47 AB977849:-47 AB978186:-47 AB978039:-47 AB977993:-47 AB977994:-47 AB977663:-62 AB978268:-68 AB977556:-71 AB977558:-71 AB978151:-106 AB306227:152 AB978071:183 AB977569:228 AY190105:229 KX076590:229 KX076265:229 KX074391:229 AB978144:229 AB978128:229 AY190104:229 KX076367:229 KX076994:229 AB978046:229 AB977892:229 AB977895:229 AB977736:229 AB977572:229 KX076600:231 KX074580:231 KX076039:234 KX076854:237 KX077035:251 MK764544:257 JF923742:269 AB977833:283 AB977783:287 AB977959:287 AB977789:287 AB978104:287 AB977903:289 AB978266:318 AF102880:326 AF428134:329 AF428133:329 DQ875572:332 DQ875553:332 DQ875585:332 DQ875548:332 DQ875589:335 DQ875586:338 AB977782:338 KX076721:347 KX076241:348 KX076571:348 KX075092:348 KX075202:348 KX075288:348 KX076106:348 KX076218:348 KX076554:348 KX076701:348 KX076712:348 KX076174:348 KX076562:348 KX074851:348 KX074995:348 KX076862:348 KX076888:348 KX076894:348 KX076899:348 KX076971:348 KX077000:348 KX074877:348 KX075301:348 KX075510:348 KX076924:348 KX076983:348 KX076859:353 M90473:353 KM004211:357 KM004745:358 MG789375:359 MG790209:359 KM004554:359 KM004562:359 KM004714:359 KM004749:359 KM004116:359 KM004262:359 KM004265:359 HM236709:362 HM236593:362 HM467881:362 KX075218:365 AY751933:365 AY751934:365 HM236609:365 HM236728:365 HM236594:365 HM236607:365 EU325978:365 KX076515:366 KX075317:366 KX076477:366 KX075796:366 KX076475:366 KX077018:366 AF395793:366 KX074397:366 KX075067:366 KX076941:366 KX076931:366 KX077009:366 KX077032:366 KX077091:366 KX076478:366 HM467882:368 HM236591:368 HM236592:368 HM467884:368 HM467885:368 EU325970:368 AY751902:371 HM236525:371 HM236730:371 AY751862:371 HM236797:371 HM467883:371 MG789001:373 MG789148:373 MG789157:373 MG789226:373 MG789247:373 MG789250:373 MG789366:373 MG789755:373 MG789829:373 MG789997:373 MG790075:373 MG790092:373 MG790170:373 MG790190:373 MG790238:373 MG790527:373 MG790572:373 MG790780:373 MG791130:373 MG791156:373 MG789005:373 MG789453:373 MG789521:373 MG789549:373 MG789886:373 MG790245:373 MG790308:373 MG790366:373 MG790431:373 MG790578:373 MG790754:373 MG790836:373 MG790880:373 MG790927:373 MG791100:373 MG791180:373 MG791378:373 MG791511:373 AJ296366:374 HM236732:374 HM236524:374 HM236619:377 HM236621:377 HM236628:377 HM236634:377 HM236636:377 HM236649:377 HM236523:377 MG790975:380 HM236731:380 KX075965:388 KX074422:388 KX074850:389 KX074899:389 HM236578:391 AY006107:404 U55152:419 U55092:419 AF079044:422 AF084011:425 AF084014:425 AF084019:425 U30188:431" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.