rfhg_101220.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -11613 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | T cell receptor beta variable 5-4 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.546875 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB977500:-2 AB305940:5 BC071724:17 AB306230:40 AB977765:88 M97707:106 X56142:106 M73465:126 AB749889:144 AB306199:149 AB305847:153 AB305804:163 X57615:164 KJ902485:170 KJ904400:170 AB164621:171 JQ778266:171 X74847:339 KX074762:350 KX076625:350 KX074659:354 AY513883:356 AB977954:372 AF430670:382 AF430673:382 AF430676:382 AF430650:382 AF430658:382 AF430659:382 AF430677:382 AF430681:382 AF430672:385 AB306143:424 X58804:440 JN695584:443 JN695576:443 JN695582:443 JN695585:443 JN695574:443 JN695572:443 KX074281:448 KX076626:448 KX074664:448 KX074286:448 KX075663:448 KX076137:453 KX074272:487 KX076575:487" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.