rfhg_101222.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -4990 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | T cell receptor beta variable 6-6 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.437500 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB978146:-1 S60794:13 AY475217:19 L06892:28 Y16434:28 Z81026:28 AB306168:50 X58815:111 AB978097:155 AB977517:162 AB306207:167 AF395523:171 AF397439:180 M64354:224 AB977935:239 KX075428:239 KX075100:239 KX074802:239 KX076255:239 AB977656:239 KX074987:240 AB977802:243 KX075026:244 KX076660:244 KX076154:245 KX076987:247 AY292273:253 KX076481:271 JF923744:279 JF923740:279 JF923741:279 AY292274:315 AY292272:334 U39121:354 KX075137:357 KX074723:358 KX075576:358 KX076150:358 KX076230:358 KX075822:358 KX076586:358 KX076504:363 KX075844:364 KM004238:367 KM004561:368 MG789849:369 MG791042:369 MG791019:369 KM004263:369 KM004694:369 KM004742:369 KM004748:369 AY751847:372 HM236611:375 HM236547:375 HM236703:375 AY751914:378 HM236584:378 HM236704:381 KX074619:382 KX075628:382 MG789048:383 MG789598:383 MG790101:383 MG790285:383 MG789010:383 MG789336:383 MG789952:383 MG790098:383 MG790375:383 MG790533:383 MG790941:383 MG790998:383 AY751865:384 HM236548:384 HM236702:384 KX075109:389 KX075408:392 X86137:397 KX076404:398 AY006109:417 AY006108:417 U46029:426 U55088:429 U55159:429 U55162:429 U55124:429" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.