rfhg_101223.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -4948 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.583333 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AY475217:-2 S60794:-8 AB306168:18 AB977465:-32 AB978241:-32 AB978243:-32 AB978227:-32 EU368854:-33 EU885174:-33 ENST00000390371.3:-37 X57606:-37 X57721:-37 AK303112:-39 X74848:-40 AB977855:-50 AB978146:-53 X58815:79 AB978097:123 AB977517:130 AB306207:135 AF395523:139 AF397439:148 M64354:192 AB977935:207 KX075428:207 KX075100:207 KX074802:207 KX076255:207 AB977656:207 KX074987:208 AB977802:211 KX075026:212 KX076660:212 KX076154:213 KX076987:215 AY292273:221 KX076481:239 JF923744:247 JF923740:247 JF923741:247 AY292274:283 AY292272:302 U39121:322 KX075137:325 KX074723:326 KX075576:326 KX076150:326 KX076230:326 KX075822:326 KX076586:326 KX076504:331 KX075844:332 KM004238:335 KM004561:336 MG789849:337 MG791042:337 MG791019:337 KM004263:337 KM004694:337 KM004742:337 KM004748:337 AY751847:340 HM236611:343 HM236547:343 HM236703:343 AY751914:346 HM236584:346 HM236704:349 KX074619:350 KX075628:350 MG789048:351 MG789598:351 MG790101:351 MG790285:351 MG789010:351 MG789336:351 MG789952:351 MG790098:351 MG790375:351 MG790533:351 MG790941:351 MG790998:351 AY751865:352 HM236548:352 HM236702:352 KX075109:357 KX075408:360 X86137:365 KX076404:366 AY006109:385 AY006108:385 U46029:394 U55088:397 U55159:397 U55162:397 U55124:397" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.