rfhg_101227.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_101227.1
Species:human
Chr:chr7
Start:142482186
End:142482188
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:M86362:230
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB306172:285
  • X58801:296
  • AB978164:310
  • AB978008:310
  • AB749875:311
  • AB749843:311
  • AB978161:313
  • LR800313:317
  • LR800314:317
  • LR800309:317
  • LR800318:317
  • LR800317:317
  • LR800316:317
  • LR800300:317
  • LR800306:317
  • LR800308:317
  • LR800307:317
  • AB978020:324
  • X51341:330
  • AB749847:334
  • AB978223:337
  • X57611:360
  • X57612:360
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:7660
Nearest PromoterID:NR_162121
Entrez ID:113839523
Nearest Unigene:
Nearest Refseq:NR_162121
Nearest Ensembl:
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "AB306172:285 X58801:296 AB978164:310 AB978008:310 AB749875:311 AB749843:311 AB978161:313 LR800313:317 LR800314:317 LR800309:317 LR800318:317 LR800317:317 LR800316:317 LR800300:317 LR800306:317 LR800308:317 LR800307:317 AB978020:324 X51341:330 AB749847:334 AB978223:337 X57611:360 X57612:360" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.