rfhg_101236.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 8309 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.600000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "JN695580:-7 JN695571:-7 JN695568:-7 JN695579:-7 AB978265:-16 AB978158:39 AB977883:47 X01411:62 AY848703:66 AF430680:-68 M13551:-73 M14299:-73 AB978011:78 AB977532:-79 AB978024:-95 HM236688:97 L38449:100 EF592016:100 X92775:100 HM236714:103 HM236687:103 JF731143:104 JF731158:106 HM236799:107 AB978096:-108 Y08295:112 KM004098:113 MG789786:114 MG789967:114 MG789983:114 MG789987:114 DQ875587:114 MG789463:114 MG789498:114 MG789600:114 MG790002:114 DQ875582:114 DQ875592:114 MG789663:114 MG790290:114 MG790641:114 MG790875:114 MG790950:114 MG791231:114 MG791243:114 MG791284:114 MG791332:114 MG791385:114 MG791552:114 MG791558:114 MG791714:114 KX076823:115 AY123164:115 AY123174:115 KX076185:115 KX075503:116 KX075568:116 KX075171:116 KX077137:116 KX075141:116 KX077023:118 KX076717:119 JF731164:123 AY751306:124 AF328976:133 L34728:145 KX076540:148 AJ305369:148 AF045809:148 S73937:157 AJ235218:166 X57611:-286 X57612:-286 AB978223:-309 AB749847:-312 X51341:-316 AB978020:-322 LR800313:-329 LR800314:-329 LR800309:-329 LR800318:-329 LR800317:-329 LR800316:-329 LR800300:-329 LR800306:-329 LR800308:-329 LR800307:-329 AB978161:-333 AB749875:-335 AB749843:-335 AB978164:-336 AB978008:-336 X58801:-350 AB306172:-361 M86362:-416" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.