rfhg_101237.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS,CTCF-bound (EH38D4041042,EH38E2597468) |
|---|---|
| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 8384 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.030303 |
| GC%: | 0.470588 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "HM236688:7 AB977883:-10 L38449:10 EF592016:10 X92775:10 HM236714:13 HM236687:13 JF731143:14 JF731158:16 HM236799:17 AB978158:-18 Y08295:22 KM004098:23 MG789786:24 MG789967:24 MG789983:24 MG789987:24 DQ875587:24 MG789463:24 MG789498:24 MG789600:24 MG790002:24 DQ875582:24 DQ875592:24 MG789663:24 MG790290:24 MG790641:24 MG790875:24 MG790950:24 MG791231:24 MG791243:24 MG791284:24 MG791332:24 MG791385:24 MG791552:24 MG791558:24 MG791714:24 KX076823:25 AY123164:25 AY123174:25 KX076185:25 KX075503:26 KX075568:26 KX075171:26 KX077137:26 KX075141:26 KX077023:28 KX076717:29 JF731164:33 AY751306:34 AF328976:43 L34728:55 KX076540:58 AJ305369:58 AF045809:58 KX075581:-63 S73937:67 JN695580:-68 JN695571:-68 JN695568:-68 JN695579:-68 AJ235218:76 AB978265:-77 AF430680:-129 M13551:-134 M14299:-134 AB977532:-140 AB978024:-156 AB978096:-169 X57611:-347 X57612:-347 AB978223:-370 AB749847:-373 X51341:-377 AB978020:-383 LR800313:-390 LR800314:-390 LR800309:-390 LR800318:-390 LR800317:-390 LR800316:-390 LR800300:-390 LR800306:-390 LR800308:-390 LR800307:-390 AB978161:-394 AB749875:-396 AB749843:-396 AB978164:-397 AB978008:-397 X58801:-411 AB306172:-422 M86362:-477" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.