rfhg_101242.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 25501 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | T cell receptor beta variable 5-6 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.000000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB305986:-3 AB977916:-4 AB977860:11 LR800304:11 AB978256:12 AB749833:13 AB977865:-18 AB977856:-24 AF020642:42 AB306205:-45 AB305811:67 AB977998:71 AB977967:-156 LR800305:-165 LR800302:-165 LR800303:-165 AB977692:-166 AB977933:-169 AB977885:-191 AB305843:210 AB305882:210 AB977942:242 AB977754:243 AB977831:243 AB977718:243 AB977857:243 AB977858:243 AB977867:243 AF430647:253 AF430652:253 AF430656:253 AF430668:253 AF430654:253 AF430657:253 AF430671:253 AF430678:253 AB977874:256 M13850:268 U39142:302 JN695577:314 JN695586:314 JN695573:314 JN695583:314 KX076724:319 KX074414:319 KX075290:319 AY229993:321 AB978198:343 JN695587:347 AB978219:392 AY751936:419 AY751923:419 AY751926:419 AY751927:419 AY751937:419 AY751836:422 AY751883:422 AY751935:422 HM236689:425 AY751913:425 X92786:425 X92787:425 HM236739:427 HM236588:428 HM236805:428 S64084:429 JF731142:429 JF731151:429 DQ473368:431 HM236806:431 JF731159:431 JF731162:431 S64083:434 AY751878:435 KM004595:438 JF731150:438 MG789133:439 MG789833:439 MG790061:439 MG790297:439 MG790425:439 DQ875562:439 DQ864994:439 DQ875549:439 MG789106:439 MG789124:439 MG789185:439 MG789206:439 MG789414:439 MG789891:439 MG790142:439 MG790194:439 MG790611:439 MG790626:439 MG790668:439 MG790792:439 MG790903:439 MG791093:439 MG791205:439 MG791229:439 MG791477:439 MG791487:439 MG791621:439 KM004620:439 KX076180:440 KX074417:440 KX074905:440 KX076731:440 KX074757:440 KX076469:440 AY123160:440 AY123158:440 AY123159:440 AY123161:440 AY123162:440 KX075988:440 JN695581:440 KX076645:441 KX074322:441 KX077042:441 KX075230:441 KX076733:442 JF731217:443 JF731219:443 U85052:452 AF200429:452 JF731145:459 AY006194:469 AF088707:473" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.