rfhg_101245.1

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Basic information about the TSS


TSS ID:rfhg_101245.1
Species:human
Chr:chr7
Start:142511587
End:142511593
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D4041074,EH38E2597498)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB306200:4
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000390377.1:33
  • LP896495:33
  • AB305825:68
  • X57607:242
  • AB977513:407
  • MG789419:443
  • MG789763:443
  • MG789989:443
  • MG790311:443
  • MG790450:443
  • MG790764:443
  • MG791258:443
  • MG791369:443
  • MG791416:443
  • MG791588:443
  • MG791712:443
  • X86116:473
  • AY006102:497
  • AY006297:497
  • AY006103:497
  • AY006104:497
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:37063
Nearest PromoterID:NR_162121
Entrez ID:113839523
Nearest Unigene:
Nearest Refseq:NR_162121
Nearest Ensembl:
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "ENST00000390377.1:33 LP896495:33 AB305825:68 X57607:242 AB977513:407 MG789419:443 MG789763:443 MG789989:443 MG790311:443 MG790450:443 MG790764:443 MG791258:443 MG791369:443 MG791416:443 MG791588:443 MG791712:443 X86116:473 AY006102:497 AY006297:497 AY006103:497 AY006104:497" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.