rfhg_101250.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 54753 |
|---|---|
| Nearest PromoterID: | NR_162121 |
| Entrez ID: | 113839523 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162121 |
| Nearest Ensembl: | |
| Gene Name: | T cell receptor beta variable 7-9 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.652174 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB977707:-7 AB977721:-7 AB305908:-8 M15564:-9 AB360850:10 AB305867:-15 AB978147:-19 X64742:21 AB306226:-22 AB305837:22 M27385:23 AB749821:-25 AB977516:-25 X58805:-26 AB306231:-26 AB306134:-26 AB977930:-26 AB305957:-26 AB305966:-26 X74844:-26 AB978209:-26 AB977771:-26 AB977918:-26 AB977561:-26 LR800358:-26 LR800319:-26 LR800323:-26 LR800292:-26 LR800294:-26 LR800357:-26 LR800293:-26 LR800345:-26 LR800325:-26 LR800321:-26 LR800311:-26 LR800320:-26 LR800322:-26 LR800326:-26 LR800346:-26 LR800347:-26 LR800310:-26 LR800312:-26 LR800324:-26 LR800327:-26 LR800328:-26 AB749863:-27 X89754:-27 AB978248:-27 AB977608:-27 AB978102:-27 AB978237:-27 AB977527:-27 AB977882:-27 AB977804:-28 AB978055:-29 AB977583:-29 AB977739:-29 AB977748:-30 AB306257:-43 AB305826:-59 AB305859:-81 AB977812:-84 M27386:171 M13552:188 AB306236:192 KX076897:204 KX076719:204 KX075466:204 KX075639:204 KX076001:204 KX075037:204 KX076080:204 AF033824:222 AB305979:241 L10117:245 KX075771:245 AF009786:254 KX075842:255 KX075704:263 L14854:266 AB978207:-267 AB978087:269 AB305855:278 KX075781:279 KX074374:279 KX075367:279 KX076510:279 KX075300:279 KX074338:279 KX074362:279 KX074550:281 KX075102:281 KX074273:281 KX074847:281 KX076047:281 KX075143:281 KX074330:281 KX074555:281 KX074836:281 KX075658:281 KX075870:282 KX075371:282 KX075756:282 KX076811:282 KX076521:282 KX074307:282 KX075802:282 KX076482:288 KX075634:291 KX076271:291 KX076506:291 KX076377:291 AB978110:294 AB978070:298 AB977723:299 AB978078:299 AB977957:300 AB977814:300 AB977744:301 AB978085:302 AB978260:302 AB977760:302 AB977504:302 AB977515:302 AB977908:302 AB977601:302 AB977735:303 AB977790:303 AB977573:304 AB978100:304 AB978168:304 AB978156:304 U40807:309 KX076503:311 JF731141:314 KX075930:319 KX077168:325 KX076704:330 KX076612:330 AF011643:-334 KX076549:346 KX076514:346 KX074761:346 JF731140:350 AB977724:357 JF731177:374 JF731170:374 JF731172:374 JF731173:374 JF731174:374 U39135:377 MG789045:378 MG789400:378 MG789577:378 MG789652:378 MG789957:378 MG790423:378 MG790452:378 MG790587:378 KM004070:378 KM004705:378 MG789449:378 MG789526:378 MG789706:378 MG789714:378 MG790184:378 MG790333:378 MG790494:378 MG790759:378 MG790773:378 MG790827:378 KM004180:378 KM004599:378 KM004635:378 KM004645:378 KM004661:378 KM004663:378 KM004682:378 KX074406:380 MH918766:380 HM236625:383 HM236686:383 HM236581:386 HM236653:386 AY751892:386 AY751920:386 KX075368:387 HM236565:389 HM236721:389 HM236754:389 HM467858:389 AY758387:389 HM236587:389 HM467866:389 KX076273:392 AY751884:392 AY751896:392 HM467865:392 HM236753:395 HM236720:395 HM236740:395 HM236741:395 HM236521:395 HM236745:395 HM467863:395 HM467864:395 HM467862:398 HM236522:398 AY751881:401 HM236604:401 MG791437:402 MG791723:402 MG790824:402 KX076019:404 KX076078:404 HM236716:405 S75191:410 S75193:410 KX076741:410 S75187:410 KX076187:410 KX076327:410 KX076158:410 KX076860:414 KX076188:414 KX076219:414 KX076864:414 KX077160:414 KX074294:415 KX076312:419 KX074830:419 KX074858:419 KX075795:419 KX076407:419 KX076182:425 X86131:428 AF189474:429 AF189484:429 AF189451:429 AF189452:429 AF189459:429 AF189492:429 AF189491:429 AF189454:429 AF189466:429 AF189490:429 AF189453:429 AF189457:429 AF189469:429 AF189476:429 AF189480:429 AY006293:431 EU395806:437 GU997647:437 GU997645:437 GU997646:437 GU997648:437 S81385:455 S81391:455 S81434:455" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.