rfhg_101271.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4041163,EH38E2597575) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -78401 |
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| Nearest PromoterID: | NM_001190487 |
| Entrez ID: | 100463482 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001190487 |
| Nearest Ensembl: | ENSG00000270672 |
| Gene Name: | |
| Gene Alias: | HN6 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.400000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "X57723:14 AB977706:-22 ENST00000617639.1:-23 AB306262:-23 AB977570:-23 AB978034:-23 AB749919:-25 AB978032:-28 AB977871:-40 X04933:213 AB978056:231 AB977811:231 AB977952:231 AB977553:231 AB977645:231 AB977630:231 DQ875554:327 KX074656:346 U39132:348 AY534309:354 AF009793:354 AF327909:357 X86130:357 MG192999:363 MG789571:363 MG790206:363 MG790684:363 MG791355:363 MG192600:363 MG192747:363 MG192776:363 MG192774:363 MG789169:363 MG790187:363 MG790469:363 MG790488:363 MG790716:363 MG790925:363 MG791009:363 KM004213:363 KM004233:363 KM004239:363 KM004696:363 MK088559:363 AY534311:366 MK088561:366 AY751938:369 HM236557:375 AJ296371:381 KX076009:384 KX076144:384 KX075662:385 KX074551:385 KX076171:385 KX074917:385 KX074549:385 KX076362:385 KX074236:385 KX075861:385 KX076093:386 KX074742:387 KX076002:388 KX075557:388 KX075626:388 KX074871:395 AB011252:399 AJ296370:400 DQ473357:405 AF317590:405 AF317604:405 AF317589:405 AF317594:405 DQ473361:405 AF317588:405 AF317592:405 AF317595:405 AF317596:405 AF317597:405 DQ473360:405 AF317591:405 AF317600:405 AF317602:405 AF317611:405 AF317613:405 AY123192:405 AF317593:405 AF317601:405 AF317603:405 AF317605:405 AF317607:405 AF317608:405 AF317609:405 AF317610:405 AF317614:405 AY123193:405 AY123195:405 AY123197:405 AF317599:405 AF317612:405 AY123194:405 AY123196:405 AY123198:405 DQ473358:405 DQ473362:405 DQ473363:405 AF317598:405 AF317606:405 AJ568018:411 AJ437624:411 DQ081720:411 AJ568019:411 AJ568020:411 AJ437623:411 AJ437625:411 AJ437626:411 AJ437627:411 AJ437628:411 AJ437629:411 AJ437630:411 AJ437631:411 AJ437632:411 AJ437633:411 AJ437634:411 AB044100:432 AB044130:432 AB044109:432 AJ437665:435 AJ437668:435" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.