rfhg_101286.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -47333 |
|---|---|
| Nearest PromoterID: | NM_001190487 |
| Entrez ID: | 100463482 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001190487 |
| Nearest Ensembl: | ENSG00000270672 |
| Gene Name: | |
| Gene Alias: | HN6 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.363636 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AB305976:-5 AB978157:13 AB305938:-19 AB977505:-19 AB305972:-19 AB305984:19 AB977770:-20 AB306212:21 AB306192:23 X74851:25 AB305841:26 AB977708:-48 AB977709:-48 AB977497:-60 AB306154:63 AB978044:-66 AB977701:-67 AB978068:-69 KJ905456:77 X61629:86 Y10199:86 AF043180:86 M27388:86 M97725:86 Y10201:86 AB305949:-87 AB977907:-87 AB977948:-87 AB977911:-87 AB978029:-87 AB978030:-87 AB977963:-87 AB977796:-89 AB977657:-96 AB305815:-99 AB305963:-100 AB977928:-100 AB305971:-105 BC073930:-112 AB305980:-121 AB977579:-125 AB305839:-132 AB977695:-133 AB978140:-133 AB978124:-134 AB749837:-137 AB978254:267 AB305983:284 AB978169:284 AB305934:297 AF020644:301 AB305919:307 AB977530:340 AB978069:350 AB977775:363 KX076468:371 KX074253:372 KX074415:372 KX076511:372 KX074566:372 KX075652:372 KX076479:372 KX074531:372 KX074991:372 KX075196:372 KX075226:372 KX075029:372 KX075382:372 KX075385:372 KX075464:372 KX076605:372 KX075313:372 KX075393:372 KX077143:372 KX077106:372 KX074834:372 KX074571:372 KX074848:372 KX075374:372 KX076181:372 KX076569:372 KX074435:372 KX074425:372 KX074627:372 KX076214:372 KX075874:375 KX075693:375 KX075104:375 KX076159:378 KX074245:378 KX076546:378 KX074332:378 KX075148:379 KX074578:380 KX076865:382 KX075612:384 KX076220:385 KX075491:385 KX074962:389 KX074463:391 KX076237:392 AB305970:395 KX074484:403 KX075219:404 KX074749:421 Z77841:422 AY239356:422 Z77849:422 AY247832:422 Z47376:422 AB977587:424 DQ875573:425 DQ875590:428 AB305857:429 AB305838:432 U39129:443 AJ296372:446 S63251:446 U39143:446 AF200428:447 KX075497:450 AY534310:452 AF009788:452 AB977940:454 U39130:455 AB977689:458 AB977757:458 KX076834:458 L34733:458 AB977550:458 KM004560:460 KM004581:460 KM004674:460 KM004113:460 KM004559:461 KM004564:461 KM004577:461 EU325972:461 EU325974:461 EU325975:461 KM004666:461 KM004731:461 AF020646:462 MG789036:462 MG789259:462 MG789308:462 MG789332:462 MG789348:462 MG789562:462 MG789739:462 MG789747:462 MG790110:462 MG790280:462 MG790536:462 MG790543:462 MG790719:462 MG790756:462 MG791026:462 MG791063:462 MG791126:462 MG791779:462 KM004152:462 KM004576:462 KM004612:462 KM004655:462 KM004720:462 KM004754:462 MG789090:462 MG789231:462 MG789266:462 MG789273:462 MG789317:462 MG789325:462 MG789507:462 MG789515:462 MG789657:462 MG789808:462 MG789908:462 MG789912:462 MG790054:462 MG790117:462 MG790255:462 MG790553:462 MG790610:462 MG790690:462 MG790707:462 MG790807:462 MG790816:462 MG790830:462 MG790839:462 MG790865:462 MG790918:462 MG790993:462 MG791251:462 MG791268:462 MG791349:462 MG791371:462 MG791442:462 MG791550:462 MG791651:462 MG791744:462 MG791767:462 MG791782:462 KM004115:462 KM004548:462 KM004611:462 KM004613:462 KM004614:462 KM004699:462 KM004723:462 KM004727:462 M90476:464 AF020648:465 X86118:465 X86119:465 X86120:465 X86122:465 X86123:465 AF020650:468 KX076629:470 U39138:470 AJ296350:471 KX076269:471 L34719:473 HM467901:473 MG790806:473 AF328971:473 AY751888:476 HM236558:476 U41098:477 KX076101:479 KX076536:479 KX076018:479 KX074380:479 KX074464:479 KX074788:479 KX075809:479 KX075308:479 KX074258:479 AY751863:479 AY751930:479 HM236595:479 HM236647:479 AF326332:479 KX074896:481 HM236559:482 HM236798:484 AY751910:485 HM236656:485 X86109:487 HM236626:491 HM236658:491 HM236664:491 X86127:492 DQ473370:497" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.