rfhg_101289.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4041198,EH38E2597607) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -39651 |
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| Nearest PromoterID: | NM_001190487 |
| Entrez ID: | 100463482 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001190487 |
| Nearest Ensembl: | ENSG00000270672 |
| Gene Name: | T cell receptor beta variable 20-1 |
| Gene Alias: | HN6 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.363636 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB977838:18 EF101778:19 AB306218:19 M97719:19 LR800361:19 LR800362:19 LR800382:19 LR800383:19 LR800380:19 LR800379:19 LR800378:19 LR800373:19 LR800360:19 LR800371:19 LR800375:19 LR800376:19 LR800372:19 LR800377:19 LR800291:19 LR800374:19 AB306216:20 AB305958:20 AB306164:23 LR800381:23 AB749921:-24 AB306170:25 AB305849:25 AB306213:32 AB306173:33 M97721:46 M97717:50 AB306131:51 X74852:54 M12886:54 M13840:55 AB306133:56 D13082:74 D13087:74 D13088:74 M14263:74 AF043182:74 AY232285:74 GQ179995:74 M13842:79 AY373824:199 AB306140:440 AB977971:440 AB977817:440 AB978257:440 AB306197:442 AB977639:447 AF020638:458 AB977777:471 M15222:477" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.