rfhg_101292.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -39080 |
|---|---|
| Nearest PromoterID: | NM_001190487 |
| Entrez ID: | 100463482 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001190487 |
| Nearest Ensembl: | ENSG00000270672 |
| Gene Name: | |
| Gene Alias: | HN6 |
| Gene Type: | protein-coding |
| CpG%: | 0.125000 |
| GC%: | 0.555556 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AB306258:-3 AB977548:-5 AB977652:-5 AB977761:-5 AB978038:-5 AB977624:-5 AB977613:-5 AB977614:-5 AB977975:-6 AB977659:-6 AB977592:-6 AB977537:-6 AB977720:-6 AB977545:-6 AB977574:-6 AB977979:-6 AB977589:-6 AB977552:-6 AB978049:-6 AB977877:-6 AB978022:-9 AY751333:-18 DQ473356:22 AB977687:-27 AB977551:40 AY848706:41 AY848708:41 AB977762:42 AB978002:-54 AB977759:57 AY611536:70 AY611548:70 L34735:73 AY611557:73 MG192949:75 MG192541:75 MG192612:75 MG192652:75 MG192658:75 MG192660:75 MG192705:75 MG192722:75 MG192754:75 MG192763:75 MG192818:75 MG192902:75 MG192933:75 MG192941:75 MG192951:75 MG193016:75 MG193075:75 MG192556:75 MG192565:75 MG192608:75 MG192661:75 MG192673:75 MG192720:75 MG192728:75 MG192741:75 MG192746:75 MG192762:75 MG192783:75 MG192874:75 MG192944:75 MG192945:75 MG192971:75 MG192982:75 MG192986:75 MG193001:75 MG193069:75 MG193098:75 MG193118:75 MG193127:75 MG192654:75 MG192853:75 MG193108:75 MG192573:75 MG192628:75 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KM004294:75 KM004301:75 KM004783:75 KM004784:75 KM004787:75 KM004788:75 KM004789:75 KM004790:75 KM004792:75 KM004793:75 KM004795:75 KM004797:75 KM004798:75 KM004801:75 KM004808:75 MG192562:75 MG192691:75 MG192729:75 MG192744:75 MG192923:75 MG192995:75 MG193011:75 MG193029:75 MG193040:75 MG193057:75 MG193089:75 MG193116:75 MG192617:75 MG192670:75 MG192900:75 MG192915:75 MG193027:75 MG192575:75 MG192578:75 MG192588:75 MG192596:75 MG192629:75 MG192752:75 MG192759:75 MG192816:75 MG192819:75 MG192836:75 MG192894:75 MG192922:75 MG193021:75 MG193103:75 MG193123:75 MG192827:75 MG192989:75 MG192544:75 MG192569:75 MG192591:75 MG192646:75 MG192742:75 MG192813:75 MG192844:75 MG192845:75 MG192859:75 MG192867:75 MG192871:75 MG192887:75 MG192943:75 MG192792:75 MG192548:75 MG192551:75 MG192568:75 MG192586:75 MG192626:75 MG192641:75 MG192649:75 MG192674:75 MG192682:75 MG192687:75 MG192807:75 MG192858:75 MG192901:75 MG192910:75 MG192912:75 MG192972:75 MG192976:75 MG192985:75 MG192991:75 MG192997:75 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AY190095:86 X92767:86 X92769:86 Z47367:86 Z97213:86 AY190097:86 AY190103:86 Z47372:86 HM236790:88 AB977777:-91 HM236576:91 HM236535:91 HM236536:91 HM236561:91 HM236785:91 HM236682:91 HM236764:91 U87866:91 AY611541:94 AY611556:94 AY611552:94 AY611538:94 AY611555:94 HM236683:94 HM236786:94 HM236787:94 HM236747:95 HM236560:97 HM236655:97 HM236678:97 HM236681:97 HM467887:97 HM467888:97 HM236652:100 HM236667:100 HM236788:100 HM236679:100 HM236680:100 HM236789:100 HM467892:100 HM467893:100 HM467894:100 HM236791:103 EF592025:103 AY751842:103 HM236748:103 HM467889:103 HM467890:103 HM467891:103 AF020638:-104 AY751840:106 AJ296355:107 AY751305:109 AY751849:109 AY751325:112 AY751329:112 AY751328:112 AY751327:112 AY751326:112 AY751330:112 U85053:112 AB977639:-115 KX074361:115 KX074846:115 KX074956:115 KX075236:115 KX075484:115 KX075656:115 KX075688:115 KX075840:115 KX075943:115 KX076026:115 KX076126:115 KX076172:115 KX076418:115 KX076608:115 KX076636:115 KX076858:115 KX075035:115 KX075188:115 KX075377:115 KX075674:115 KX075755:115 KX075767:115 KX075769:115 KX075855:115 KX076365:115 KX076381:115 KX076539:115 KX077144:115 KX077150:115 KX075402:115 KX076184:115 KX074485:115 KX075659:115 KX075910:115 KX076264:115 KX076790:115 KX075370:115 KX074331:115 KX074960:115 KX075525:115 KX076055:115 KX076161:115 KX076726:115 KX076801:115 KX076826:115 KX077107:115 KX074692:115 KX074950:115 KX074955:115 KX075033:115 KX075247:115 KX075538:115 KX075882:115 KX075906:115 KX077164:115 AF327915:115 KX074265:115 KX074297:115 KX074654:115 KX074661:115 KX074911:115 KX075046:115 KX075217:115 KX075295:115 KX075315:115 KX075359:115 KX075369:115 KX075375:115 KX075417:115 KX075814:115 KX075833:115 KX076160:115 KX076277:115 KX076328:115 KX076335:115 KX076361:115 KX076375:115 KX076406:115 KX076609:115 KX076837:115 KX074900:115 KX074953:115 KX075235:115 KX075885:115 KX076073:115 KX076115:115 KX076125:115 KX074518:115 KX074797:115 KX075237:115 KX075299:115 KX075877:115 KX075907:115 KX076374:115 KX076464:115 KX077044:115 KX077159:115 KX074257:115 KX075070:115 KX075806:115 KX075821:115 KX074313:115 KX074356:115 KX074726:115 KX075454:115 KX075777:115 KX076173:115 KX076803:115 KX076825:115 KX076975:115 KX075373:115 KX076275:115 KX074250:115 KX074712:115 KX074959:115 KX075025:115 KX075028:115 KX075045:115 KX075192:115 KX075384:115 KX075567:115 KX075633:115 KX075706:115 KX075753:115 KX075838:115 KX075868:115 KX076032:115 KX076513:115 KX076737:115 KX076740:115 KX076799:115 KX076800:115 KX077155:115 AY751331:115 KX076578:116 KX076628:116 KX077087:116 KX076597:116 KX076627:116 KX076178:116 KX076310:116 KX076318:116 KX074234:116 KX074835:116 KX076857:116 KX076817:116 KX074451:116 KX075216:116 KX076186:116 KX076317:116 KX077130:116 KX074718:116 KX076863:116 KX075635:116 KX074741:117 KX076891:117 U40815:117 KX076715:117 KX074754:117 KX074702:118 KX074701:118 KX074703:118 KX074951:118 AB306197:-120 AB306140:-122 AB977971:-122 AB977817:-122 AB978257:-122 KX076373:126 KX076238:127 AY751309:129 X86135:130 AF395796:132 AF327911:133 AF327022:136 AY006091:136 AY006115:145 AY006114:145 AY006121:145 AY006127:145 AY006286:145 AY006116:145 AY006117:145 AY751318:148 U55110:151 AY373824:-363 M13842:-483 D13082:-488 D13087:-488 D13088:-488 M14263:-488 AF043182:-488 AY232285:-488 GQ179995:-488" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.