rfhg_101311.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4041273,EH38E2597661) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -34141 |
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| Nearest PromoterID: | NM_002769 |
| Entrez ID: | 5644 |
| Nearest Unigene: | Hs.382212 |
| Nearest Refseq: | NM_002769 |
| Nearest Ensembl: | ENSG00000204983 |
| Gene Name: | T cell receptor beta variable 27 |
| Gene Alias: | TRP1|TRY1|TRY4|TRYP1 |
| Gene Type: | protein-coding |
| CpG%: | 0.034483 |
| GC%: | 0.500000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB978133:1 AB978232:4 AB305823:5 AB977676:-8 AB978084:8 AB978190:8 AB977785:8 AB977668:8 AB978203:8 AB977823:8 AF272745:10 AB306260:10 AB305921:12 AB305956:13 AB749905:15 AB306208:16 AB749881:16 AB977674:-18 AB978041:19 AB978127:21 AB977843:21 AB978131:21 AB978197:21 AB977779:21 AB305893:22 AB305896:22 AB977658:22 AB305973:22 AB305868:22 AB977703:22 AB977893:22 AB977584:22 AB977498:23 AB977575:31 AF043181:43 M14267:43 FJ795366:43 AB978113:46 AF272742:64 M13865:218 AB978163:222 AB306209:227 AB305873:227 AB977507:231 AB978160:242 AB305915:248 EF592018:259 AB305886:263 AB305866:274 AB305871:285 X04928:289 AB977586:293 AB977846:301 AB977742:310 AB978045:316 AB977850:318 AB977864:318 AB978148:325 AB978149:326 AB977824:328 KX074591:334 KX076079:334 U39131:334 KX075151:335 KX075298:335 KX075831:336 KX075310:337 KX074760:337 KX074479:337 KX074992:337 KX075690:337 KX076422:338 U39128:340 KX075134:343 KX077051:343 KX074482:343 KX075462:343 AB305965:352 L34736:355 L34724:355 AB305905:355 X51794:358 L34731:361 X51790:365 KX075154:368 KX076925:371 KX076727:378 X51788:379 L34725:379 AB977540:382 S63248:388 S63249:388 KX074363:404 KX075542:408 AB977539:412 KM004659:416 KM004074:417 KM004173:417 KM004566:417 KM004598:417 KM004650:417 MG192595:418 MG192856:418 MG192961:418 MG192650:418 MG192675:418 MG192830:418 MG192909:418 MG192992:418 MG192954:418 MG192647:418 MG192755:418 MG192761:418 MG192777:418 MG192847:418 MG192852:418 MG193039:418 MG193090:418 MG192655:418 MG192711:418 MG789177:418 MG789233:418 MG789294:418 MG789586:418 MG789898:418 MG790033:418 MG790224:418 MG790364:418 MG790433:418 MG790539:418 MG790681:418 MG790820:418 MG790860:418 MG790868:418 MG790885:418 MG791390:418 KM004569:418 KM004634:418 KM004652:418 KM004718:418 KM004722:418 MG192878:418 MG192925:418 MG193046:418 MG192736:418 MG192542:418 MG192567:418 MG192809:418 MG192881:418 MG192977:418 MG192724:418 MG192793:418 MG192879:418 MG192905:418 MG192965:418 MG192602:418 MG192656:418 MG192802:418 MG192826:418 MG192870:418 MG192928:418 MG789116:418 MG789135:418 MG789581:418 MG789716:418 MG789731:418 MG789780:418 MG789781:418 MG789813:418 MG789856:418 MG789913:418 MG789919:418 MG789960:418 MG789963:418 MG790007:418 MG790025:418 MG790141:418 MG790153:418 MG790172:418 MG790243:418 MG790298:418 MG790401:418 MG790465:418 MG790484:418 MG790541:418 MG790548:418 MG790733:418 MG790873:418 MG790952:418 MG791207:418 MG791241:418 MG791260:418 MG791395:418 MG791400:418 MG791409:418 MG791418:418 MG791427:418 MG791445:418 MG791490:418 MG791505:418 MG791592:418 MG791601:418 MG791638:418 MG791642:418 MG791691:418 MG791697:418 MG791703:418 MG791717:418 MG791734:418 MG791755:418 MG791769:418 KM004105:418 KM004597:418 KM004747:418 EF212879:424 KX075390:424 AY190102:424 KX075135:424 KX075039:424 X92876:424 AY190090:424 KX075695:424 KX076286:424 KX074743:424 KX076334:424 KX076720:424 AJ276203:424 AJ507143:424 AJ437667:424 HM236802:424 KX074874:424 KX074994:424 KX075851:424 KX074796:424 KX075366:424 AY190114:424 AY190094:424 KX075683:424 KX074989:424 KX075786:424 KX076745:424 AY751929:424 AJ276196:424 AJ276198:424 AJ276199:424 AJ276200:424 AJ276201:424 AJ276202:424 AY239354:424 AJ507144:424 AJ437359:424 AJ437356:424 AJ507145:424 AJ507146:424 AJ507147:424 AJ507142:424 AJ437349:424 AJ437350:424 AJ437351:424 AJ437352:424 AJ437353:424 AJ437354:424 AJ437355:424 AJ437357:424 AJ437358:424 AJ437664:424 AJ437666:424 HM236736:427 AY751918:427 AY611543:430 AY611545:430 AY751861:430 AY751867:430 KX074606:431 HM236538:433 HM236614:433 HM236644:433 HM236650:433 HM236651:433 HM236669:433 AJ276204:433 HM467899:433 AJ276197:433 HM236517:434 AY751925:436 AY751869:436 HM236734:436 HM236710:438 U41097:438 AB977669:438 HM236735:439 HM236671:439 HM236672:439 HM236707:439 HM467845:442 HM467848:442 HM236708:445 HM568210:451 HM568238:451 HM568239:451 HM568232:451 HM568230:451 HM568231:451 HM568235:451 HM568237:451 HM568233:451 HM568234:451 HM568236:451 HM568224:451 HM568225:451 HM568226:451 HM568227:451 HM568228:451 HM568229:451 AF100783:451 EU325980:457 EU325971:457 EU325979:457 X86117:459 X86134:460 AF043817:469 AF043818:469 AF043771:469 AF043772:469 AF043773:469 AF043774:469 AF043775:469 AF043776:469 AF043777:469 AF043778:469 AF043781:469 AF043782:469 AF043885:469 AF043887:469 AF043891:469 AF043893:469 AF043895:469 AF043783:469 AF043784:469 AF043785:469 AF043786:469 AF043787:469 AF043788:469 AF043789:469 AF043819:469 AF043820:469 AF043821:469 AF043822:469 AF043823:469 AF043824:469 AF043825:469 AF043790:469 AF043827:469 AF043860:469 AF043861:469 AF043862:469 AF043889:469 X86124:470 X86108:471 AF189514:472 AF189549:472 AF189507:472 AF189518:472 AF189543:472 AF189546:472 AF189551:472 AF189557:472 AF189572:472 AF189500:472 AF189512:472 AF189525:472 AF189540:472 AF189578:472 AJ012538:472 AF189580:472 AF189495:472 AF189494:472 AF189506:472 AF189528:472 AF189539:472 AF189542:472 AF189570:472 AF189521:472 AF189547:472 AF189571:472 AF189582:472 AF189585:472 AF189586:472 AF189584:472 AF189497:472 AF189513:472 AF189524:472 AF189544:472 AF189550:472 AF189555:472 AF189561:472 AF189567:472 AF189568:472 AF189569:472 AF189574:472 AF189589:472 AY006313:472 AF189509:472 AF189510:472 AF189511:472 AF189527:472 AF189548:472 AF189564:472 AF189566:472 AF189577:472 AF189499:472 AF189502:472 AF189541:472 AF189558:472 AF189559:472 AF189562:472 AF189565:472 AF189579:472 AF189503:472 AF189529:472 AF189556:472 AF189588:472 AF189498:472 AF189517:472 AF189519:472 AF189530:472 AF189533:472 AF189534:472 AF189537:472 AF189553:472 AF189554:472 AF189560:472 AF189575:472 AF189576:472 AF189583:472 AF189523:472 AF189505:472 U55094:484 AF117137:493 AB044121:493 AB044127:493" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.