rfhg_10137.1

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Basic information about the TSS


TSS ID:rfhg_10137.1
Species:human
Chr:chr1
Start:106028224
End:106028232
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000417385.2:-21
GeneID:
HGNC/MGI_ID:HGNC:52465
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000635636.1:-45
  • ENST00000635342.1:162
view more...
Gene_name:long intergenic non-protein coding RNA 1677
Gene_symbol:LINC01677
Gene_synonyms:
Gene_source:HGNC:52465



TATA-Box annotation


Distance to TSS:25
Nearest PromoterID:NR_146609
Entrez ID:105378884
Nearest Unigene:Hs.568533
Nearest Refseq:NR_146609
Nearest Ensembl:
Gene Name:long intergenic non-protein coding RNA 1677
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.