rfhg_101395.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_101395.1
Species:human
Chr:chr7
Start:142787012
End:142787032
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000633553.1:0
GeneID:
HGNC/MGI_ID:HGNC:12163
UniProt_ID:A0A0J9YX06
Nearer transcript ids and distances:
  • AF088761:-121
  • KJ905476:-121
  • BC073797:-121
  • D32024:-124
  • D32028:-124
  • X86142:-125
  • D50753:-126
  • AF088784:-127
  • U84142:-127
  • S66967:-128
  • AB044131:-128
  • L77711:-128
  • S73936:-128
  • AF088752:-128
  • AF088763:-128
  • D32014:-129
  • U07133:-129
  • AF088750:-129
  • AF088751:-130
  • AF088757:-130
  • M90477:-130
  • S66973:-131
  • D32021:-131
  • AF088734:-131
  • AF088783:-131
  • D50771:-131
  • MG790278:-131
  • AF088714:-132
  • AF328972:-132
  • S66969:-133
  • AF117130:-135
view more...
Gene_name:T cell receptor beta joining 1-2
Gene_symbol:TRBJ1-2
Gene_synonyms:TCRBJ1S2 TRBJ12
Gene_source:HGNC:12163



TATA-Box annotation


Distance to TSS:16052
Nearest PromoterID:NM_002770
Entrez ID:5645
Nearest Unigene:Hs.449281
Nearest Refseq:NM_002770
Nearest Ensembl:ENSG00000275896
Gene Name:T cell receptor beta joining 1-2
Gene Alias:TRY2|TRY8|TRYP2
Gene Type:protein-coding
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "AF088761:-121 KJ905476:-121 BC073797:-121 D32024:-124 D32028:-124 X86142:-125 D50753:-126 AF088784:-127 U84142:-127 S66967:-128 AB044131:-128 L77711:-128 S73936:-128 AF088752:-128 AF088763:-128 D32014:-129 U07133:-129 AF088750:-129 AF088751:-130 AF088757:-130 M90477:-130 S66973:-131 D32021:-131 AF088734:-131 AF088783:-131 D50771:-131 MG790278:-131 AF088714:-132 AF328972:-132 S66969:-133 AF117130:-135" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.