rfhg_101407.1

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Basic information about the TSS


TSS ID:rfhg_101407.1
Species:human
Chr:chr7
Start:142788802
End:142788820
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D4041334,EH38E2597715)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB076780:167
AF088722:167
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • GQ502869:171
  • AB044126:173
  • AF088715:174
  • KM004773:174
  • D32022:175
  • AF326333:175
  • AF088717:176
  • KM004278:177
  • D50749:178
  • AF395789:178
  • AF088711:-295
  • S66972:-298
  • AB076762:-298
  • AB076764:-298
  • KM004766:-298
  • KM004775:-298
  • AF088779:-300
  • KM004772:-300
  • AB044132:-301
  • D32015:-302
  • AF088584:-302
  • D32033:-303
  • AF088710:-303
  • AB044110:-304
  • AF395791:-304
  • S69556:-304
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:17841
Nearest PromoterID:NM_002770
Entrez ID:5645
Nearest Unigene:Hs.449281
Nearest Refseq:NM_002770
Nearest Ensembl:ENSG00000275896
Gene Name:
Gene Alias:TRY2|TRY8|TRYP2
Gene Type:protein-coding
CpG%:0.000000
GC%:0.526316
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "GQ502869:171 AB044126:173 AF088715:174 KM004773:174 D32022:175 AF326333:175 AF088717:176 KM004278:177 D50749:178 AF395789:178 AF088711:-295 S66972:-298 AB076762:-298 AB076764:-298 KM004766:-298 KM004775:-298 AF088779:-300 KM004772:-300 AB044132:-301 D32015:-302 AF088584:-302 D32033:-303 AF088710:-303 AB044110:-304 AF395791:-304 S69556:-304" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.