rfhg_101422.1

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Basic information about the TSS


TSS ID:rfhg_101422.1
Species:human
Chr:chr7
Start:142796133
End:142796141
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D4041350,EH38E2597731)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:M13867:-37
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • D32026:223
  • D32032:223
  • D32037:223
  • L77705:223
  • AF088716:223
  • AF088725:223
  • MG790887:223
  • D50750:224
  • AF088724:225
  • AB076766:226
  • AB076779:226
  • D32031:226
  • AF088723:226
  • AF088782:226
  • AF088785:226
  • AF088799:226
  • AB076750:227
  • AB076753:227
  • AB044104:228
  • AB076758:228
  • D32034:228
  • U07135:228
  • S69569:228
  • AF088323:228
  • AF088524:229
  • D32036:230
  • U07138:230
  • AF088709:230
  • AF088781:230
  • AF088790:230
  • U07137:231
  • AF088743:231
  • AF088789:231
  • AB076763:232
  • AB076769:232
  • AF088721:232
  • AF088728:232
  • KM004276:232
  • D31827:233
  • AF088731:233
  • D50744:417
  • AB044117:418
  • AB076752:418
  • AF088726:420
  • AF088730:421
  • AB044123:423
  • AB076767:423
  • AB076782:423
  • L77728:423
  • AF088705:423
  • D50762:423
  • AB076785:424
  • D50755:424
  • KM004279:428
  • L77713:429
  • AF088749:429
  • X04924:-456
  • X04930:-456
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:25167
Nearest PromoterID:NM_002770
Entrez ID:5645
Nearest Unigene:Hs.449281
Nearest Refseq:NM_002770
Nearest Ensembl:ENSG00000275896
Gene Name:
Gene Alias:TRY2|TRY8|TRYP2
Gene Type:protein-coding
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "D32026:223 D32032:223 D32037:223 L77705:223 AF088716:223 AF088725:223 MG790887:223 D50750:224 AF088724:225 AB076766:226 AB076779:226 D32031:226 AF088723:226 AF088782:226 AF088785:226 AF088799:226 AB076750:227 AB076753:227 AB044104:228 AB076758:228 D32034:228 U07135:228 S69569:228 AF088323:228 AF088524:229 D32036:230 U07138:230 AF088709:230 AF088781:230 AF088790:230 U07137:231 AF088743:231 AF088789:231 AB076763:232 AB076769:232 AF088721:232 AF088728:232 KM004276:232 D31827:233 AF088731:233 D50744:417 AB044117:418 AB076752:418 AF088726:420 AF088730:421 AB044123:423 AB076767:423 AB076782:423 L77728:423 AF088705:423 D50762:423 AB076785:424 D50755:424 KM004279:428 L77713:429 AF088749:429 X04924:-456 X04930:-456" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.